Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01722 and H281DRAFT_01723 are separated by 175 nucleotidesH281DRAFT_01723 and H281DRAFT_01724 overlap by 4 nucleotidesH281DRAFT_01724 and H281DRAFT_01725 are separated by 176 nucleotidesH281DRAFT_01725 and H281DRAFT_01726 are separated by 40 nucleotides H281DRAFT_01722: H281DRAFT_01722 - Sugar lactone lactonase YvrE, at 611,566 to 612,798 _01722 H281DRAFT_01723: H281DRAFT_01723 - ParD-like antitoxin of type II toxin-antitoxin system, at 612,974 to 613,186 _01723 H281DRAFT_01724: H281DRAFT_01724 - methionine aminopeptidase, type I, at 613,183 to 613,950 _01724 H281DRAFT_01725: H281DRAFT_01725 - ADP-heptose:LPS heptosyltransferase, at 614,127 to 615,296 _01725 H281DRAFT_01726: H281DRAFT_01726 - transcriptional regulator, TetR family, at 615,337 to 615,915 _01726
Group Condition H281DRAFT_01722 H281DRAFT_01723 H281DRAFT_01724 H281DRAFT_01725 H281DRAFT_01726
carbon source 2-Deoxy-D-Ribose 10 mM (C) N.D. N.D. -0.4 +0.1 -2.9
carbon source Gallic Acid (C) N.D. N.D. +0.1 -0.3 -1.7
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. -0.0 -0.3 -1.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.4 -0.1 -1.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.7 -0.1 -0.8
carbon source Valeric (C) N.D. N.D. -0.2 -0.2 -1.2
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. +0.1 -0.0 -1.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.0 +0.1 -1.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.2 +0.2 -1.3
carbon source adipate (C) N.D. N.D. +0.5 +0.2 -1.9
carbon source adipate (C) N.D. N.D. -0.1 -0.2 -1.0
carbon source Malonic (C) N.D. N.D. -0.4 -0.1 -0.8
carbon source Protocatechuic Acid (C) N.D. N.D. -0.1 +0.1 -1.2
carbon source 2-Deoxy-D-ribonic lithium salt (C) N.D. N.D. +0.2 -0.1 -1.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. +0.0 -0.0 -1.2
carbon source 2-Deoxy-D-Ribose 20 mM (C) N.D. N.D. -0.4 -0.0 -0.7
carbon source 2-Deoxy-D-ribonic lithium salt (C) N.D. N.D. +0.0 -0.2 -0.9
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. -0.0 -0.2 -0.9
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +0.1 +0.0 -1.2
carbon source D-Glucose (C) N.D. N.D. -0.1 +0.2 -1.1
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. -0.1 +0.1 -1.0
carbon source Phenylacetic (C) N.D. N.D. +0.1 +0.1 -1.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.4 +0.2 -0.8
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. N.D. +0.2 +0.1 -1.0
carbon source Phenylacetic (C) N.D. N.D. +0.3 +0.2 -1.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. +0.1 +0.2 -0.8
carbon source Protocatechuic Acid (C) N.D. N.D. +0.2 +0.1 -0.8
phage Bu1_100 N.D. N.D. +0.3 +0.1 -0.7
carbon source D-Glucose (C) N.D. N.D. +0.4 -0.3 +0.4
carbon source Hexanoic (C) N.D. N.D. +0.6 -0.1 +0.4
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