Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Top 30 experiments (either direction), sorted by average fitness

Or view all 128 experiments or choose conditions or try the comparative fitness browser

Group	Condition	H281DRAFT_01656	H281DRAFT_01657	H281DRAFT_01658	H281DRAFT_01659	H281DRAFT_01660
carbon source	Malonic (C)	-1.3	-0.6	-0.5	-0.4	-0.4
phage	Bu1_10	+0.0	-0.6	-0.7	-0.2	-1.3
carbon source	adipate (C)	-1.5	-0.2	-0.3	-0.8	+0.1
carbon source	adipate (C)	-1.3	-1.0	-0.1	-0.3	+0.3
carbon source	acetate (C)	-0.8	-0.6	-0.6	+0.2	-0.1
carbon source	Valeric (C)	-0.8	-0.7	-0.5	+0.3	+0.2
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	+0.3	-0.7	+0.4	-0.9	-0.4
carbon source	3-hydroxybutyric (C)	-0.3	+0.2	-0.2	-0.9	+0.1
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-0.8	+0.5	+0.3	-0.6	-0.3
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-0.5	+0.2	+0.3	-0.6	-0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.8	+0.1	+0.2	-0.5	+0.2
phage	Bu1_100	+1.5	-1.4	-0.1	-1.1	+0.4
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	+0.3	-0.7	+0.4	-0.4	-0.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.3	-0.5	+0.2	-0.6	+0.1
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM	-0.9	+0.0	+0.0	-0.2	+0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.1	-0.2	+0.2	-0.6	+0.4
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.4	-0.6	+0.1	-0.4	+0.2
carbon source	2'-Deoxyinosine 10 mM (C)	+0.3	-0.7	+0.4	+0.2	-0.3
carbon source	2-Deoxy-D-Ribose (C)	+0.5	+0.1	-0.5	-0.6	+0.3
carbon source	Protocatechuic Acid (C)	-0.5	+0.4	-0.3	+0.3	+0.1
carbon source	D-Glucose (C)	+0.4	-0.5	-0.3	+0.2	+0.2
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	+0.2	+0.7	-0.4	-0.1	-0.2
carbon source	2-Deoxy-D-Ribose 20 mM (C)	+0.6	-0.2	+0.4	-0.0	-0.7
ecofab	LB in EcoFAB_3.5mL	+0.2	-0.3	+0.5	+0.2	-0.5
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	+0.6	-0.4	+0.7	-0.3	-0.1
in planta	Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.6	-0.7	-0.1	+0.5	+0.1
lb	LB	+0.2	-0.5	-0.2	+0.8	+0.2
carbon source	butyrate (C)	+0.4	-0.1	-0.3	+0.6	+0.2
carbon source	propionate (C)	+0.3	+0.4	+0.2	+0.4	-0.4
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	+0.3	-0.7	+1.0	+0.7	+0.0