Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01622 and H281DRAFT_01623 are separated by 110 nucleotidesH281DRAFT_01623 and H281DRAFT_01624 are separated by 260 nucleotidesH281DRAFT_01624 and H281DRAFT_01625 are separated by 211 nucleotidesH281DRAFT_01625 and H281DRAFT_01626 are separated by 29 nucleotides H281DRAFT_01622: H281DRAFT_01622 - serine O-acetyltransferase, at 502,424 to 503,350 _01622 H281DRAFT_01623: H281DRAFT_01623 - hypothetical protein, at 503,461 to 503,694 _01623 H281DRAFT_01624: H281DRAFT_01624 - Protein of unknown function (DUF3005), at 503,955 to 504,407 _01624 H281DRAFT_01625: H281DRAFT_01625 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 504,619 to 505,224 _01625 H281DRAFT_01626: H281DRAFT_01626 - putative spermidine/putrescine transport system permease protein, at 505,254 to 506,180 _01626
Group Condition H281DRAFT_01622 H281DRAFT_01623 H281DRAFT_01624 H281DRAFT_01625 H281DRAFT_01626
carbon source Hexanoic (C) -0.7 N.D. -0.6 N.D. -0.8
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.4 N.D. -0.8 N.D. -0.2
carbon source 2'-Deoxyinosine 10 mM (C) -0.9 N.D. -0.1 N.D. -0.2
carbon source adipate (C) +0.1 N.D. -0.3 N.D. -0.9
carbon source Valeric (C) -0.4 N.D. -0.4 N.D. -0.3
carbon source 2'-Deoxyinosine 10 mM (C) -0.6 N.D. -0.3 N.D. -0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 N.D. -0.6 N.D. -0.1
carbon source acetate (C) -0.0 N.D. -0.4 N.D. -0.5
carbon source 2-furoic (C) -0.8 N.D. -0.0 N.D. -0.1
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 N.D. -0.1 N.D. -0.6
carbon source D,L-Lactate (C) -0.3 N.D. -0.1 N.D. -0.4
carbon source butyrate (C) -0.6 N.D. -0.3 N.D. +0.1
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 N.D. -0.4 N.D. -0.3
carbon source Protocatechuic Acid (C) -0.3 N.D. +0.2 N.D. -0.7
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.0 N.D. -0.8 N.D. -0.0
carbon source 2'-Deoxyinosine 5 mM (C) -0.6 N.D. +0.1 N.D. -0.2
carbon source 2'-Deoxyinosine 5 mM (C) -0.9 N.D. +0.1 N.D. +0.1
carbon source Dodecandioic (C) +0.2 N.D. -0.5 N.D. -0.3
carbon source propionate (C) +0.1 N.D. -0.1 N.D. -0.6
phage Bu1_100 -0.3 N.D. +0.3 N.D. -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 N.D. -0.4 N.D. -0.4
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.2 N.D. -0.6 N.D. +0.1
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.1 N.D. -0.4 N.D. +0.2
carbon source D-Glucose (C) -0.3 N.D. -0.3 N.D. +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 N.D. -0.3 N.D. -0.4
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.0 N.D. -0.5 N.D. +0.3
control NoPhageControl -0.3 N.D. +0.5 N.D. -0.3
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.7 N.D. +0.2 N.D. +0.3
carbon source Gallic Acid (C) +0.4 N.D. -0.4 N.D. +0.0
carbon source 4-Hydroxybenzoic Acid (C) +0.2 N.D. +0.5 N.D. -0.1
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