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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia bryophila 376MFSha3.1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
H281DRAFT_01615 and H281DRAFT_01616 are separated by 180 nucleotides
H281DRAFT_01616 and H281DRAFT_01617 are separated by 434 nucleotides
H281DRAFT_01617 and H281DRAFT_01618 are separated by 1 nucleotides
H281DRAFT_01618 and H281DRAFT_01619 are separated by 297 nucleotides
H281DRAFT_01615: H281DRAFT_01615 - hypothetical protein, at 495,641 to 497,602
_01615
H281DRAFT_01616: H281DRAFT_01616 - hypothetical protein, at 497,783 to 498,343
_01616
H281DRAFT_01617: H281DRAFT_01617 - hypothetical protein, at 498,778 to 498,990
_01617
H281DRAFT_01618: H281DRAFT_01618 - Outer membrane protein (porin), at 498,992 to 500,143
_01618
H281DRAFT_01619: H281DRAFT_01619 - hypothetical protein, at 500,441 to 500,854
_01619
Group
Condition
H281DRAFT
_01615
H281DRAFT
_01616
H281DRAFT
_01617
H281DRAFT
_01618
H281DRAFT
_01619
in planta
Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.2
-0.5
-1.2
-0.3
-0.8
carbon source
Dodecandioic (C)
+0.1
-0.5
-1.0
-0.0
-0.3
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM
-0.1
-0.1
-0.4
-0.2
-0.7
in planta
Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
+0.1
-0.4
-0.6
-0.2
-0.4
in planta
Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days
-0.3
-0.3
-0.7
+0.0
-0.2
phage
Bu1_100
+0.2
+0.2
-0.6
-0.1
-1.0
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
+0.2
-0.7
-0.3
-0.2
-0.3
carbon source
D-Glucose (C)
+0.1
-0.5
-0.5
+0.0
-0.2
carbon source
2-Deoxy-D-Ribose (C)
+0.1
-0.2
-0.7
-0.0
-0.1
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
+0.2
-0.1
-0.9
+0.2
-0.2
carbon source
Valeric (C)
-0.2
+0.1
-0.3
-0.5
+0.2
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
+0.0
-0.1
-0.7
+0.2
-0.1
carbon source
2'-Deoxyinosine 5 mM (C)
+0.0
-0.4
-0.7
+0.0
+0.3
carbon source
p-Coumaric (C)
+0.1
+0.1
-0.7
+0.1
-0.3
carbon source
Valeric (C)
-0.0
+0.1
-0.7
-0.2
+0.2
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
+0.5
-0.3
-0.5
-0.1
-0.2
carbon source
succinate (C)
-0.0
+0.1
-1.0
+0.0
+0.3
supernatant
RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x
-0.2
-0.4
+0.5
-0.1
-0.4
carbon source
Malonic (C)
-0.0
-0.2
-0.5
-0.3
+0.8
carbon source
Protocatechuic Acid (C)
+0.0
+0.4
-0.6
-0.1
-0.0
phage
Bu1_100
+0.1
-0.4
+0.5
-0.1
-0.4
lb
LB
-0.1
+0.0
-0.6
-0.0
+0.5
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM
+0.2
-0.3
+0.5
-0.2
-0.1
phage
Bu1_10
+0.1
-0.6
-0.4
-0.0
+1.1
carbon source
Sebacic (C)
+0.1
+0.3
+0.5
+0.1
-0.6
carbon source
2'-Deoxyinosine 5 mM (C)
+0.1
+0.4
-0.2
+0.2
+0.3
carbon source
2-furoic (C)
+0.1
+0.3
+0.4
+0.3
-0.2
carbon source
adipate (C)
+0.2
-0.1
+0.8
-0.1
+0.3
carbon source
Malonic (C)
-0.0
+0.5
+0.2
+0.1
+0.4
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
+0.2
+0.5
+0.5
-0.1
+0.2
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