Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01615 and H281DRAFT_01616 are separated by 180 nucleotidesH281DRAFT_01616 and H281DRAFT_01617 are separated by 434 nucleotidesH281DRAFT_01617 and H281DRAFT_01618 are separated by 1 nucleotidesH281DRAFT_01618 and H281DRAFT_01619 are separated by 297 nucleotides H281DRAFT_01615: H281DRAFT_01615 - hypothetical protein, at 495,641 to 497,602 _01615 H281DRAFT_01616: H281DRAFT_01616 - hypothetical protein, at 497,783 to 498,343 _01616 H281DRAFT_01617: H281DRAFT_01617 - hypothetical protein, at 498,778 to 498,990 _01617 H281DRAFT_01618: H281DRAFT_01618 - Outer membrane protein (porin), at 498,992 to 500,143 _01618 H281DRAFT_01619: H281DRAFT_01619 - hypothetical protein, at 500,441 to 500,854 _01619
Group Condition H281DRAFT_01615 H281DRAFT_01616 H281DRAFT_01617 H281DRAFT_01618 H281DRAFT_01619
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 -0.5 -1.2 -0.3 -0.8
carbon source Dodecandioic (C) +0.1 -0.5 -1.0 -0.0 -0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.1 -0.1 -0.4 -0.2 -0.7
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 -0.4 -0.6 -0.2 -0.4
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.3 -0.3 -0.7 +0.0 -0.2
phage Bu1_100 +0.2 +0.2 -0.6 -0.1 -1.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 -0.7 -0.3 -0.2 -0.3
carbon source D-Glucose (C) +0.1 -0.5 -0.5 +0.0 -0.2
carbon source 2-Deoxy-D-Ribose (C) +0.1 -0.2 -0.7 -0.0 -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 -0.1 -0.9 +0.2 -0.2
carbon source Valeric (C) -0.2 +0.1 -0.3 -0.5 +0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.0 -0.1 -0.7 +0.2 -0.1
carbon source 2'-Deoxyinosine 5 mM (C) +0.0 -0.4 -0.7 +0.0 +0.3
carbon source p-Coumaric (C) +0.1 +0.1 -0.7 +0.1 -0.3
carbon source Valeric (C) -0.0 +0.1 -0.7 -0.2 +0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 -0.3 -0.5 -0.1 -0.2
carbon source succinate (C) -0.0 +0.1 -1.0 +0.0 +0.3
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.2 -0.4 +0.5 -0.1 -0.4
carbon source Malonic (C) -0.0 -0.2 -0.5 -0.3 +0.8
carbon source Protocatechuic Acid (C) +0.0 +0.4 -0.6 -0.1 -0.0
phage Bu1_100 +0.1 -0.4 +0.5 -0.1 -0.4
lb LB -0.1 +0.0 -0.6 -0.0 +0.5
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM +0.2 -0.3 +0.5 -0.2 -0.1
phage Bu1_10 +0.1 -0.6 -0.4 -0.0 +1.1
carbon source Sebacic (C) +0.1 +0.3 +0.5 +0.1 -0.6
carbon source 2'-Deoxyinosine 5 mM (C) +0.1 +0.4 -0.2 +0.2 +0.3
carbon source 2-furoic (C) +0.1 +0.3 +0.4 +0.3 -0.2
carbon source adipate (C) +0.2 -0.1 +0.8 -0.1 +0.3
carbon source Malonic (C) -0.0 +0.5 +0.2 +0.1 +0.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.2 +0.5 +0.5 -0.1 +0.2
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