Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01583 and H281DRAFT_01584 are separated by 31 nucleotidesH281DRAFT_01584 and H281DRAFT_01585 are separated by 41 nucleotidesH281DRAFT_01585 and H281DRAFT_01586 overlap by 4 nucleotidesH281DRAFT_01586 and H281DRAFT_01587 overlap by 4 nucleotides H281DRAFT_01583: H281DRAFT_01583 - nicotinate dehydrogenase subunit A, at 461,862 to 462,368 _01583 H281DRAFT_01584: H281DRAFT_01584 - enamidase, at 462,400 to 463,599 _01584 H281DRAFT_01585: H281DRAFT_01585 - amino acid/amide ABC transporter ATP-binding protein 2, HAAT family, at 463,641 to 464,354 _01585 H281DRAFT_01586: H281DRAFT_01586 - amino acid/amide ABC transporter ATP-binding protein 1, HAAT family, at 464,351 to 465,160 _01586 H281DRAFT_01587: H281DRAFT_01587 - amino acid/amide ABC transporter membrane protein 1, HAAT family /amino acid/amide ABC transporter membrane protein 2, HAAT family, at 465,157 to 467,097 _01587
Group Condition H281DRAFT_01583 H281DRAFT_01584 H281DRAFT_01585 H281DRAFT_01586 H281DRAFT_01587
carbon source Azelaic (C) N.D. -2.1 N.D. N.D. +0.0
control NoPhageControl N.D. -0.7 N.D. N.D. -1.2
carbon source Pimelic (C) N.D. -0.8 N.D. N.D. -0.9
carbon source adipate (C) N.D. -0.9 N.D. N.D. -0.8
carbon source propionate (C) N.D. -1.0 N.D. N.D. -0.5
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.6 N.D. N.D. -1.0
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. -1.4 N.D. N.D. -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. +0.2 N.D. N.D. -1.5
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. -0.9 N.D. N.D. -0.4
carbon source acetate (C) N.D. -0.0 N.D. N.D. -1.2
carbon source D-Glucose (C) N.D. -0.7 N.D. N.D. -0.4
carbon source succinate (C) N.D. -0.5 N.D. N.D. -0.6
carbon source 4-Hydroxybenzoic Acid (C) N.D. -1.9 N.D. N.D. +0.9
carbon source adipate (C) N.D. +1.1 N.D. N.D. -1.5
carbon source Malonic (C) N.D. +0.4 N.D. N.D. -0.8
carbon source Protocatechuic Acid (C) N.D. +0.6 N.D. N.D. -0.7
carbon source Valeric (C) N.D. -0.9 N.D. N.D. +0.8
carbon source D,L-Lactate (C) N.D. +0.7 N.D. N.D. -0.7
carbon source propionate (C) N.D. +0.5 N.D. N.D. -0.5
carbon source propionate (C) N.D. +0.7 N.D. N.D. -0.4
carbon source Protocatechuic Acid (C) N.D. +1.0 N.D. N.D. -0.4
carbon source 2'-Deoxyinosine 5 mM (C) N.D. +0.9 N.D. N.D. -0.2
carbon source 3-hydroxybutyric (C) N.D. +1.2 N.D. N.D. -0.4
phage Bu1_100 N.D. +1.3 N.D. N.D. -0.3
phage Bu1_10 N.D. +0.8 N.D. N.D. +0.3
carbon source D-Glucose (C) N.D. +0.9 N.D. N.D. +0.3
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. +0.8 N.D. N.D. +0.5
carbon source L-Glutamic (C) N.D. +0.7 N.D. N.D. +0.5
carbon source Malonic (C) N.D. +1.0 N.D. N.D. +0.4
phage Bu1_100 N.D. +1.6 N.D. N.D. -0.1
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