Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01560 and H281DRAFT_01561 are separated by 30 nucleotidesH281DRAFT_01561 and H281DRAFT_01562 are separated by 153 nucleotidesH281DRAFT_01562 and H281DRAFT_01563 are separated by 151 nucleotidesH281DRAFT_01563 and H281DRAFT_01564 are separated by 108 nucleotides H281DRAFT_01560: H281DRAFT_01560 - hypothetical protein, at 431,767 to 432,537 _01560 H281DRAFT_01561: H281DRAFT_01561 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 432,568 to 433,332 _01561 H281DRAFT_01562: H281DRAFT_01562 - transcriptional regulator, LysR family, at 433,486 to 434,403 _01562 H281DRAFT_01563: H281DRAFT_01563 - MFS transporter, CP family, cyanate transporter, at 434,555 to 435,892 _01563 H281DRAFT_01564: H281DRAFT_01564 - diguanylate cyclase/phosphodiesterase, at 436,001 to 438,934 _01564
Group Condition H281DRAFT_01560 H281DRAFT_01561 H281DRAFT_01562 H281DRAFT_01563 H281DRAFT_01564
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 N.D. -0.1 -0.3 -0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 N.D. -0.0 -0.1 -0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 N.D. +0.0 -0.4 -0.1
carbon source D-Glucose (C) -0.4 N.D. +0.1 -0.2 -0.1
carbon source Hexanoic (C) -0.5 N.D. -0.2 -0.1 +0.1
phage Bu1_10 -0.6 N.D. +0.2 -0.3 +0.0
carbon source butyrate (C) -0.4 N.D. -0.1 -0.2 +0.1
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.2 N.D. -0.3 -0.2 +0.1
carbon source Valeric (C) -0.4 N.D. -0.4 +0.3 +0.0
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.3 N.D. +0.2 -0.3 -0.0
carbon source Dodecandioic (C) -0.1 N.D. -0.4 +0.4 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM -0.2 N.D. -0.3 +0.3 -0.0
carbon source Malonic (C) -0.2 N.D. +0.3 -0.3 +0.1
carbon source propionate (C) -0.3 N.D. -0.1 +0.3 -0.1
carbon source Hydroxy-L-Proline (C) -0.1 N.D. +0.4 -0.3 -0.0
carbon source Malonic (C) +0.2 N.D. -0.3 -0.1 +0.2
carbon source Suberic (C) +0.2 N.D. -0.3 +0.3 -0.1
carbon source Protocatechuic Acid (C) -0.1 N.D. -0.3 +0.6 -0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.4 N.D. +0.4 -0.4 -0.2
carbon source acetate (C) +0.2 N.D. -0.2 +0.3 -0.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 N.D. -0.0 +0.3 +0.3
carbon source Hexanoic (C) -0.2 N.D. -0.0 +0.4 +0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.5 N.D. +0.1 -0.2 +0.0
phage Bu1_100 +0.2 N.D. -0.3 +0.5 +0.1
carbon source succinate (C) +0.3 N.D. -0.2 +0.4 +0.0
carbon source 4-Hydroxybenzoic Acid (C) +0.2 N.D. +0.1 +0.4 -0.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.0 N.D. +0.4 +0.3 -0.1
carbon source D,L-Lactate (C) +0.5 N.D. -0.1 +0.2 +0.1
carbon source 2-furoic (C) -0.0 N.D. +0.3 +0.3 +0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 N.D. +0.3 +0.3 +0.2
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