Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01550 and H281DRAFT_01551 are separated by 36 nucleotidesH281DRAFT_01551 and H281DRAFT_01552 are separated by 50 nucleotidesH281DRAFT_01552 and H281DRAFT_01553 are separated by 192 nucleotidesH281DRAFT_01553 and H281DRAFT_01554 are separated by 148 nucleotides H281DRAFT_01550: H281DRAFT_01550 - membrane fusion protein, multidrug efflux system, at 423,042 to 424,289 _01550 H281DRAFT_01551: H281DRAFT_01551 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 424,326 to 425,819 _01551 H281DRAFT_01552: H281DRAFT_01552 - DNA-binding transcriptional regulator, MarR family, at 425,870 to 426,307 _01552 H281DRAFT_01553: H281DRAFT_01553 - Uncharacterized conserved protein, DUF1330 family, at 426,500 to 426,787 _01553 H281DRAFT_01554: H281DRAFT_01554 - RNA polymerase sigma-70 factor, ECF subfamily, at 426,936 to 427,439 _01554
Group Condition H281DRAFT_01550 H281DRAFT_01551 H281DRAFT_01552 H281DRAFT_01553 H281DRAFT_01554
carbon source 2-Deoxy-D-Ribose (C) -0.4 -0.5 N.D. N.D. -1.0
carbon source Valeric (C) -0.0 +0.4 N.D. N.D. -2.0
ecofab LB in EcoFAB_3.5mL -0.2 -0.5 N.D. N.D. -0.9
carbon source Valeric (C) +0.0 -0.1 N.D. N.D. -1.4
phage Bu1_100 -0.0 -0.7 N.D. N.D. -0.5
carbon source 4-Hydroxybenzoic Acid (C) -0.1 -0.7 N.D. N.D. -0.4
carbon source Dodecandioic (C) -0.2 -0.7 N.D. N.D. -0.3
carbon source Protocatechuic Acid (C) +0.0 -0.4 N.D. N.D. -0.8
carbon source 2-Deoxy-D-Ribose (C) +0.0 -0.4 N.D. N.D. -0.7
carbon source L-Glutamic (C) -0.2 -0.4 N.D. N.D. -0.5
carbon source Hydroxy-L-Proline (C) -0.1 -0.6 N.D. N.D. -0.4
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.1 -0.7 N.D. N.D. -0.5
phage Bu1_10 -0.4 -0.2 N.D. N.D. -0.3
carbon source butyrate (C) -0.1 +0.1 N.D. N.D. -0.9
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.0 +0.1 N.D. N.D. -1.0
carbon source Sebacic (C) +0.1 +0.2 N.D. N.D. -1.2
carbon source acetate (C) +0.3 -0.3 N.D. N.D. -0.6
carbon source Hexanoic (C) -0.3 +0.4 N.D. N.D. -0.7
carbon source 2'-Deoxyinosine 5 mM (C) +0.2 +0.0 N.D. N.D. -0.8
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.4 -0.4 N.D. N.D. +0.4
carbon source acetate (C) -0.1 -0.7 N.D. N.D. +0.6
carbon source succinate (C) +0.2 +0.6 N.D. N.D. -0.8
carbon source Malonic (C) +0.3 -0.8 N.D. N.D. +0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 -0.3 N.D. N.D. +0.6
carbon source 2'-Deoxyinosine 5 mM (C) +0.2 -0.4 N.D. N.D. +0.5
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM -0.2 +0.8 N.D. N.D. -0.1
carbon source 2'-Deoxyinosine 10 mM (C) -0.1 -0.1 N.D. N.D. +0.8
carbon source D-Glucose (C) +0.1 -0.1 N.D. N.D. +0.8
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.2 +0.3 N.D. N.D. +0.8
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.0 +0.9 N.D. N.D. +0.3
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