Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	H281DRAFT_01510	H281DRAFT_01511	H281DRAFT_01512	H281DRAFT_01513	H281DRAFT_01514
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	-0.2	-1.2	-0.2	-0.3	-0.7
carbon source	L-Glutamic (C)	-0.3	-0.8	-0.6	-0.4	-0.2
carbon source	2-Deoxy-D-Ribose (C)	+0.0	-1.0	-0.2	-0.2	-0.9
carbon source	2'-Deoxyinosine 10 mM (C)	-0.3	-0.7	-0.6	+0.3	-0.7
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.1	+0.2	-1.5	+0.1	-0.6
carbon source	adipate (C)	-0.3	-0.4	-0.2	+0.6	-1.2
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	+0.3	-0.8	-0.4	-0.0	-0.5
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.2	-0.7	+0.1	+0.2	-0.8
carbon source	Azelaic (C)	+0.1	+0.4	+0.2	-0.2	-1.9
phage	Bu1_100	-0.3	+0.9	-1.2	-0.1	-0.6
carbon source	Valeric (C)	-0.2	-0.3	+0.4	-0.4	-0.7
carbon source	Sebacic (C)	-0.3	-1.2	+0.6	+0.8	-1.2
carbon source	D-Glucose (C)	-0.2	-0.5	-0.8	-0.1	+0.3
carbon source	Hexanoic (C)	+0.2	-0.4	+0.2	+0.1	-1.2
carbon source	Protocatechuic Acid (C)	-0.8	-0.5	+1.5	-0.5	-0.5
carbon source	adipate (C)	+0.3	-0.7	-0.8	+0.5	-0.0
carbon source	Dodecandioic (C)	+0.4	-0.4	+0.1	+0.3	-0.8
carbon source	succinate (C)	+0.3	-0.3	+0.5	-0.3	-0.7
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x	+0.2	-0.4	+0.7	+0.1	-0.9
supernatant	LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-0.1	-0.9	+0.7	+0.1	-0.2
carbon source	acetate (C)	+0.1	+0.2	+0.9	-0.4	-1.0
carbon source	2-Deoxy-D-Ribose (C)	-0.5	-0.1	-0.5	-0.1	+1.0
carbon source	Protocatechuic Acid (C)	+0.0	-0.9	+0.8	-0.4	+0.3
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM	-0.4	+0.0	+1.0	+0.1	-0.8
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-0.2	+0.7	-1.1	+0.6	+0.2
supernatant	LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x	-0.4	-0.5	+0.8	+0.3	+0.2
carbon source	Malonic (C)	+0.2	+0.3	+0.7	+0.0	-0.6
carbon source	D-Glucose (C)	-0.1	-0.4	+0.6	-0.2	+0.7
carbon source	Protocatechuic Acid (C)	-0.0	-0.0	+1.4	-0.0	-0.4
supernatant	RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-0.0	-0.1	+0.6	+0.5	+0.6