Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01504 and H281DRAFT_01505 are separated by 394 nucleotidesH281DRAFT_01505 and H281DRAFT_01506 are separated by 29 nucleotidesH281DRAFT_01506 and H281DRAFT_01507 are separated by 78 nucleotidesH281DRAFT_01507 and H281DRAFT_01508 are separated by 65 nucleotides H281DRAFT_01504: H281DRAFT_01504 - 3-oxoadipyl-CoA thiolase, at 373,667 to 374,869 _01504 H281DRAFT_01505: H281DRAFT_01505 - Nucleoside-diphosphate-sugar epimerase, at 375,264 to 376,244 _01505 H281DRAFT_01506: H281DRAFT_01506 - hydroxypyruvate isomerase, at 376,274 to 377,059 _01506 H281DRAFT_01507: H281DRAFT_01507 - D-galactonate transporter, at 377,138 to 378,472 _01507 H281DRAFT_01508: H281DRAFT_01508 - Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase, at 378,538 to 379,200 _01508
Group Condition H281DRAFT_01504 H281DRAFT_01505 H281DRAFT_01506 H281DRAFT_01507 H281DRAFT_01508
carbon source 4-Hydroxybenzoic Acid (C) -5.1 -0.7 -0.3 -0.0 +0.1
carbon source Protocatechuic Acid (C) -3.4 +0.0 -0.1 -0.1 -0.5
carbon source Protocatechuic Acid (C) -3.4 -0.7 -0.1 +0.1 +0.0
carbon source Protocatechuic Acid (C) -3.1 +0.1 -0.4 -0.2 +0.1
carbon source Protocatechuic Acid (C) -3.0 +0.2 -0.0 -0.1 -0.4
carbon source Protocatechuic Acid (C) -2.8 -0.2 +0.0 -0.2 -0.1
carbon source p-Coumaric (C) -2.7 -0.2 -0.2 -0.0 +0.2
carbon source Protocatechuic Acid (C) -2.9 +0.2 +0.0 +0.1 -0.1
carbon source adipate (C) -2.0 -0.3 +0.0 -0.3 +0.2
carbon source p-Coumaric (C) -2.3 +0.2 +0.1 -0.1 +0.2
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.0 -0.5 -0.2 -0.2 -1.0
carbon source adipate (C) -1.9 -0.3 +0.0 +0.1 +0.3
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.3 +0.1 -0.4 -0.5 -0.6
carbon source 3-hydroxybutyric (C) -0.1 -0.7 -0.3 -0.2 -0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.1 -0.6 -0.7 +0.0 +0.0
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.3 +0.1 -0.3 -0.4 -0.2
carbon source Malonic (C) +0.2 -0.8 -0.5 +0.1 -0.2
carbon source Phenylacetic (C) +0.1 -0.9 -0.1 +0.2 -0.4
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.1 +0.2 -0.5 -0.1 -0.6
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.1 -0.7 -0.2 +0.3 -0.4
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.4 +0.1 -0.3 +0.3 -0.6
phage Bu1_100 -0.1 -0.3 -0.8 -0.1 +0.2
carbon source Valeric (C) -0.2 +0.3 +0.2 -0.3 -0.7
carbon source D-Glucose (C) +0.1 +0.7 -0.5 -0.5 -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 +0.8 -0.1 -0.0 -0.6
carbon source Sebacic (C) -0.3 +0.5 +0.5 -0.1 -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 +1.0 -0.2 -0.2 -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 +1.4 +0.0 -0.2 -0.5
control NoPhageControl +0.1 +0.6 +0.3 -0.5 +0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 +1.1 +0.4 -0.2 -0.5
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