Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 128 experiments or choose conditions or try the comparative fitness browser

500 ntH281DRAFT_01497 and H281DRAFT_01498 are separated by 102 nucleotidesH281DRAFT_01498 and H281DRAFT_01499 are separated by 103 nucleotidesH281DRAFT_01499 and H281DRAFT_01500 are separated by 22 nucleotidesH281DRAFT_01500 and H281DRAFT_01501 are separated by 12 nucleotides H281DRAFT_01497: H281DRAFT_01497 - Predicted oxidoreductase, at 367,034 to 367,909 _01497 H281DRAFT_01498: H281DRAFT_01498 - transcriptional regulator, LysR family, at 368,012 to 368,908 _01498 H281DRAFT_01499: H281DRAFT_01499 - hypothetical protein, at 369,012 to 370,241 _01499 H281DRAFT_01500: H281DRAFT_01500 - hypothetical protein, at 370,264 to 370,692 _01500 H281DRAFT_01501: H281DRAFT_01501 - hypothetical protein, at 370,705 to 371,823 _01501
Group Condition H281DRAFT_01497 H281DRAFT_01498 H281DRAFT_01499 H281DRAFT_01500 H281DRAFT_01501
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.9 +0.0 +0.1 N.D. -0.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.3 -0.1 -0.3 N.D. -0.3
carbon source Dodecandioic (C) +0.0 -0.8 +0.2 N.D. -0.3
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.4 +0.0 -0.3 N.D. -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.7 -0.2 -0.1 N.D. +0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 -0.4 +0.0 N.D. -0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.4 -0.3 -0.0 N.D. -0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.6 -0.0 -0.2 N.D. +0.2
carbon source Valeric (C) -0.4 -0.3 -0.2 N.D. +0.1
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.3 +0.2 -0.2 N.D. -0.3
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.7 +0.2 -0.0 N.D. +0.1
carbon source 2'-Deoxyinosine 10 mM (C) -0.2 +0.4 -0.6 N.D. -0.2
carbon source Protocatechuic Acid (C) +0.3 -0.3 -0.2 N.D. -0.3
carbon source 4-Hydroxybenzoic Acid (C) +0.2 -0.2 -0.7 N.D. +0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 -0.5 +0.4 N.D. -0.1
ecofab LB in EcoFAB_3.5mL -0.3 +0.1 +0.3 N.D. -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 -0.3 -0.0 N.D. +0.4
carbon source butyrate (C) +0.4 -0.8 +0.2 N.D. +0.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.1 +0.5 -0.5 N.D. -0.2
carbon source Azelaic (C) -0.2 +0.2 +0.3 N.D. -0.3
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.5 -0.1 -0.2 N.D. -0.1
phage Bu1_100 +0.1 +0.3 -0.5 N.D. +0.1
carbon source Phenylacetic (C) -0.1 +0.4 -0.6 N.D. +0.3
carbon source Phenylacetic (C) +0.3 +0.3 -0.5 N.D. +0.0
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.2 +0.3 -0.2 N.D. -0.2
phage Bu1_100 +0.7 -0.3 -0.4 N.D. +0.2
carbon source Valeric (C) +0.5 +0.2 +0.0 N.D. -0.4
control NoPhageControl +0.2 +0.1 +0.2 N.D. -0.3
carbon source Hexanoic (C) +0.3 +0.4 +0.0 N.D. -0.3
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.7 +0.4 -0.3 N.D. -0.1
remove
H281DRAFT_01497
plot		 remove
H281DRAFT_01498
plot		 remove
H281DRAFT_01499		 remove
H281DRAFT_01500
plot		 remove
H281DRAFT_01501
plot