Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 128 experiments or choose conditions or try the comparative fitness browser

500 ntH281DRAFT_01449 and H281DRAFT_01450 are separated by 40 nucleotidesH281DRAFT_01450 and H281DRAFT_01451 are separated by 50 nucleotidesH281DRAFT_01451 and H281DRAFT_01452 are separated by 4 nucleotidesH281DRAFT_01452 and H281DRAFT_01453 overlap by 1 nucleotides H281DRAFT_01449: H281DRAFT_01449 - RIO kinase 1, at 312,678 to 313,535 _01449 H281DRAFT_01450: H281DRAFT_01450 - transcriptional regulator, LacI family, at 313,576 to 314,628 _01450 H281DRAFT_01451: H281DRAFT_01451 - carbohydrate ABC transporter ATP-binding protein, CUT1 family, at 314,679 to 315,926 _01451 H281DRAFT_01452: H281DRAFT_01452 - carbohydrate ABC transporter membrane protein 2, CUT1 family, at 315,931 to 316,848 _01452 H281DRAFT_01453: H281DRAFT_01453 - carbohydrate ABC transporter membrane protein 1, CUT1 family, at 316,848 to 317,807 _01453
Group Condition H281DRAFT_01449 H281DRAFT_01450 H281DRAFT_01451 H281DRAFT_01452 H281DRAFT_01453
carbon source Valeric (C) -0.2 -0.8 -0.7 -0.3 -0.2
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.5 -0.5 -0.2 -0.5 -0.0
phage Bu1_100 -0.7 +0.3 -0.7 -0.6 -0.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 +0.2 -0.5 -0.4 -0.7
carbon source acetate (C) -0.4 -0.5 -0.5 +0.4 -0.1
carbon source Dodecandioic (C) -0.4 -0.9 +0.1 +0.2 -0.1
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.5 +0.3 -0.5 -0.5 +0.2
carbon source butyrate (C) -0.3 -1.2 -0.2 +0.6 -0.0
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.5 +0.4 +0.0 -0.6 -0.2
carbon source Hexanoic (C) -0.1 -1.1 +0.2 +0.4 -0.3
carbon source adipate (C) -0.0 -0.6 -0.5 +0.5 -0.0
carbon source 2'-Deoxyinosine 10 mM (C) -0.7 +0.6 -0.3 -0.4 +0.1
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.5 -0.2 -0.2 +0.7 -0.2
carbon source Sebacic (C) +1.0 -0.9 -0.2 +0.1 -0.2
carbon source Protocatechuic Acid (C) +0.5 -0.4 -0.8 +0.5 -0.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.3 -0.3 +0.5 +0.5 -0.5
carbon source 2'-Deoxyinosine 5 mM (C) -0.9 +0.3 +0.3 +0.1 +0.2
carbon source Protocatechuic Acid (C) +0.3 -0.7 +0.0 +0.6 -0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.3 +0.6 +0.5 +0.4 -0.7
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.7 +0.7 +0.0 +0.2 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 -0.7 +0.7 +0.2 +0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.4 +1.1 +0.1 +0.1 -0.2
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.7 +0.5 +0.4 +0.5 +0.1
control NoPhageControl +0.9 -0.3 +0.0 +0.6 -0.3
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.6 +0.5 +0.0 +0.4 -0.2
phage Bu1_10 +1.3 -0.2 +0.0 -0.2 +0.5
carbon source Azelaic (C) +1.0 -0.3 -0.1 +0.5 +0.4
carbon source Gallic Acid (C) -0.2 +0.4 +0.7 +0.7 -0.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.0 +1.1 +0.5 +0.1 -0.1
carbon source 4-Hydroxybenzoic Acid (C) +0.7 +0.7 -0.2 +0.1 +0.5
remove
H281DRAFT_01449
plot		 remove
H281DRAFT_01450
plot		 remove
H281DRAFT_01451		 remove
H281DRAFT_01452
plot		 remove
H281DRAFT_01453
plot