Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01423 and H281DRAFT_01424 are separated by 346 nucleotidesH281DRAFT_01424 and H281DRAFT_01425 are separated by 194 nucleotidesH281DRAFT_01425 and H281DRAFT_01426 are separated by 107 nucleotidesH281DRAFT_01426 and H281DRAFT_01427 are separated by 190 nucleotides H281DRAFT_01423: H281DRAFT_01423 - hypothetical protein, at 279,173 to 279,940 _01423 H281DRAFT_01424: H281DRAFT_01424 - Protein of unknown function (DUF2384), at 280,287 to 280,571 _01424 H281DRAFT_01425: H281DRAFT_01425 - NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family, at 280,766 to 281,509 _01425 H281DRAFT_01426: H281DRAFT_01426 - transcriptional regulator, TetR family, at 281,617 to 282,267 _01426 H281DRAFT_01427: H281DRAFT_01427 - hypothetical protein, at 282,458 to 282,934 _01427
Group Condition H281DRAFT_01423 H281DRAFT_01424 H281DRAFT_01425 H281DRAFT_01426 H281DRAFT_01427
carbon source adipate (C) -0.4 N.D. N.D. -2.0 N.D.
carbon source Valeric (C) -0.9 N.D. N.D. -0.8 N.D.
carbon source Dodecandioic (C) -0.7 N.D. N.D. -0.9 N.D.
carbon source propionate (C) -0.5 N.D. N.D. -0.9 N.D.
phage Bu1_100 +0.1 N.D. N.D. -1.4 N.D.
carbon source butyrate (C) -0.1 N.D. N.D. -1.1 N.D.
carbon source acetate (C) -0.4 N.D. N.D. -0.7 N.D.
carbon source Protocatechuic Acid (C) -0.2 N.D. N.D. -0.8 N.D.
carbon source Hexanoic (C) -0.2 N.D. N.D. -0.8 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 N.D. N.D. -0.7 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.0 N.D. N.D. -0.9 N.D.
carbon source Valeric (C) -0.6 N.D. N.D. -0.3 N.D.
control NoPhageControl -0.7 N.D. N.D. -0.1 N.D.
carbon source Protocatechuic Acid (C) +0.3 N.D. N.D. -1.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.3 N.D. N.D. -0.5 N.D.
carbon source Protocatechuic Acid (C) +0.1 N.D. N.D. -0.9 N.D.
carbon source D-Glucose (C) -0.1 N.D. N.D. -0.6 N.D.
carbon source Pimelic (C) +0.2 N.D. N.D. -0.9 N.D.
carbon source Hydroxy-L-Proline (C) +0.1 N.D. N.D. -0.8 N.D.
carbon source adipate (C) +0.2 N.D. N.D. -0.9 N.D.
carbon source Phenylacetic (C) +0.2 N.D. N.D. -0.6 N.D.
phage Bu1_10 +0.4 N.D. N.D. -0.5 N.D.
carbon source Suberic (C) +0.3 N.D. N.D. -0.4 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.6 N.D. N.D. -0.6 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.4 N.D. N.D. +0.4 N.D.
carbon source D,L-Lactate (C) -0.3 N.D. N.D. +0.5 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM -0.4 N.D. N.D. +0.6 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.4 N.D. N.D. +0.6 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.1 N.D. N.D. +0.6 N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.0 N.D. N.D. +0.8 N.D.
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