Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01415 and H281DRAFT_01416 are separated by 267 nucleotidesH281DRAFT_01416 and H281DRAFT_01417 are separated by 311 nucleotidesH281DRAFT_01417 and H281DRAFT_01418 are separated by 106 nucleotidesH281DRAFT_01418 and H281DRAFT_01419 are separated by 502 nucleotides H281DRAFT_01415: H281DRAFT_01415 - hypothetical protein, at 267,774 to 267,989 _01415 H281DRAFT_01416: H281DRAFT_01416 - NADH dehydrogenase, at 268,257 to 269,486 _01416 H281DRAFT_01417: H281DRAFT_01417 - anti-sigma-28 factor, FlgM family, at 269,798 to 270,109 _01417 H281DRAFT_01418: H281DRAFT_01418 - Signal transduction histidine kinase, at 270,216 to 274,808 _01418 H281DRAFT_01419: H281DRAFT_01419 - Protein of unknown function (DUF2945), at 275,311 to 275,526 _01419
Group Condition H281DRAFT_01415 H281DRAFT_01416 H281DRAFT_01417 H281DRAFT_01418 H281DRAFT_01419
ecofab LB in EcoFAB_3.5mL N.D. +0.2 -1.0 +0.2 -1.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. -0.5 -0.4 -0.2 -0.7
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. -0.2 -1.1 +0.0 -0.5
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. -0.3 -0.5 -0.1 -0.7
carbon source Gallic Acid (C) N.D. -0.6 -0.7 +0.1 -0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. -0.3 -0.8 +0.2 -0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. -0.3 -0.5 +0.2 -0.3
carbon source Phenylacetic (C) N.D. -0.2 +0.3 -0.0 -0.9
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.7 -0.3 -0.1 -1.1
carbon source adipate (C) N.D. -0.2 +0.4 +0.3 -1.3
carbon source Protocatechuic Acid (C) N.D. -0.3 +0.3 +0.4 -0.8
carbon source D,L-Lactate (C) N.D. +0.1 -0.9 -0.0 +0.5
carbon source Protocatechuic Acid (C) N.D. +0.1 +0.2 +0.2 -0.9
carbon source Malonic (C) N.D. -0.0 +0.4 +0.1 -0.8
phage Bu1_10 N.D. -0.1 -0.7 -0.2 +0.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.0 +0.9 -0.1 -0.8
carbon source D-Glucose (C) N.D. -0.5 +0.8 +0.1 -0.2
phage Bu1_100 N.D. +0.4 +0.7 -0.3 -0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +1.0 -0.5 +0.1 -0.4
carbon source Azelaic (C) N.D. +0.2 +0.8 +0.2 -0.7
carbon source L-Glutamic (C) N.D. +0.0 +0.9 +0.3 -0.2
carbon source butyrate (C) N.D. -0.2 +0.5 +0.4 +0.4
carbon source propionate (C) N.D. -0.0 +1.2 +0.2 -0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.9 +0.8 -0.1 -0.2
carbon source adipate (C) N.D. -0.3 +1.0 +0.6 -0.0
carbon source succinate (C) N.D. +0.1 +0.6 +0.0 +0.7
carbon source Hexanoic (C) N.D. +0.3 +0.5 +0.3 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +1.0 +0.4 +0.1 +0.0
carbon source Valeric (C) N.D. +0.3 +1.0 +0.1 +0.4
carbon source butyrate (C) N.D. +0.1 +0.9 +0.2 +0.7
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