Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01392 and H281DRAFT_01393 are separated by 16 nucleotidesH281DRAFT_01393 and H281DRAFT_01394 overlap by 4 nucleotidesH281DRAFT_01394 and H281DRAFT_01395 are separated by 19 nucleotidesH281DRAFT_01395 and H281DRAFT_01396 are separated by 134 nucleotides H281DRAFT_01392: H281DRAFT_01392 - two component transcriptional regulator, winged helix family, at 245,546 to 246,259 _01392 H281DRAFT_01393: H281DRAFT_01393 - hydrophobic/amphiphilic exporter-1, HAE1 family, at 246,276 to 249,407 _01393 H281DRAFT_01394: H281DRAFT_01394 - RND family efflux transporter, MFP subunit, at 249,404 to 250,612 _01394 H281DRAFT_01395: H281DRAFT_01395 - efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family, at 250,632 to 252,203 _01395 H281DRAFT_01396: H281DRAFT_01396 - hypothetical protein, at 252,338 to 252,628 _01396
Group Condition H281DRAFT_01392 H281DRAFT_01393 H281DRAFT_01394 H281DRAFT_01395 H281DRAFT_01396
carbon source Azelaic (C) N.D. -0.1 -2.9 +0.2 +0.1
carbon source 4-Hydroxybenzoic Acid (C) N.D. -0.2 -1.3 +0.0 -0.8
carbon source Sebacic (C) N.D. -0.3 -1.3 +0.1 -0.4
carbon source butyrate (C) N.D. +0.1 +0.1 +0.3 -2.1
carbon source D-Glucose (C) N.D. -0.1 -0.5 -0.2 -0.6
carbon source D-Glucose (C) N.D. -0.1 -0.5 -0.3 -0.5
carbon source Valeric (C) N.D. -0.0 -1.0 -0.4 +0.0
carbon source Gallic Acid (C) N.D. -0.1 -0.9 -0.1 -0.3
carbon source acetate (C) N.D. +0.0 -1.3 -0.2 +0.1
carbon source butyrate (C) N.D. -0.2 -0.2 -0.1 -0.8
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. +0.0 +0.1 -0.4 -0.9
phage Bu1_10 N.D. -0.0 -0.5 -0.3 -0.3
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. -0.1 -0.4 -0.0 -0.5
carbon source 3-Hydroxypropionate (C) N.D. +0.0 -0.4 -0.1 -0.6
carbon source Malonic (C) N.D. +0.1 -0.8 +0.1 -0.2
carbon source adipate (C) N.D. +0.0 -1.1 -0.0 +0.3
carbon source Hexanoic (C) N.D. +0.0 -1.1 +0.2 +0.3
carbon source Suberic (C) N.D. +0.2 -0.6 -0.2 +0.2
carbon source propionate (C) N.D. -0.0 -0.7 -0.1 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.1 -0.6 -0.2 +0.3
carbon source Protocatechuic Acid (C) N.D. +0.2 -0.8 +0.3 +0.0
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. -0.3 +0.6 -0.2 -0.3
carbon source propionate (C) N.D. -0.2 -0.5 +0.0 +0.4
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. -0.1 +0.5 +0.0 -0.5
carbon source succinate (C) N.D. +0.1 -0.7 -0.0 +0.6
carbon source Protocatechuic Acid (C) N.D. +0.5 -0.6 +0.0 +0.3
carbon source 2'-Deoxyinosine 5 mM (C) N.D. +0.1 +0.5 +0.0 -0.5
carbon source D-Glucose (C) N.D. -0.2 -0.3 -0.0 +0.7
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. +0.1 +0.2 -0.2 +0.6
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. +0.4 +0.8 -0.2 -0.0
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