Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01365 and H281DRAFT_01366 are separated by 46 nucleotidesH281DRAFT_01366 and H281DRAFT_01367 are separated by 239 nucleotidesH281DRAFT_01367 and H281DRAFT_01368 are separated by 136 nucleotidesH281DRAFT_01368 and H281DRAFT_01369 are separated by 184 nucleotides H281DRAFT_01365: H281DRAFT_01365 - transcriptional regulator, LysR family, at 208,507 to 209,436 _01365 H281DRAFT_01366: H281DRAFT_01366 - hypothetical protein, at 209,483 to 209,794 _01366 H281DRAFT_01367: H281DRAFT_01367 - Protein of unknown function (DUF2891), at 210,034 to 211,044 _01367 H281DRAFT_01368: H281DRAFT_01368 - PRC-barrel domain-containing protein, at 211,181 to 211,606 _01368 H281DRAFT_01369: H281DRAFT_01369 - DNA damage-inducible DNA polymerase II, at 211,791 to 214,157 _01369
Group Condition H281DRAFT_01365 H281DRAFT_01366 H281DRAFT_01367 H281DRAFT_01368 H281DRAFT_01369
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 -0.6 -0.1 N.D. -0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -0.9 -0.3 N.D. +0.1
carbon source 2-Deoxy-D-Ribose (C) -0.3 -1.2 +0.1 N.D. +0.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.6 -0.6 +0.2 N.D. -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -0.7 -0.1 N.D. -0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -0.2 -0.6 N.D. +0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.6 -0.3 +0.1 N.D. -0.3
carbon source Protocatechuic Acid (C) -0.3 -0.8 +0.2 N.D. -0.1
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.1 -0.8 +0.1 N.D. -0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.6 -0.7 +0.4 N.D. -0.0
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.5 -0.4 +0.3 N.D. -0.1
carbon source p-Coumaric (C) -0.3 -0.5 +0.4 N.D. -0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM -0.8 +0.1 +0.1 N.D. -0.1
carbon source Pimelic (C) -0.3 -0.5 +0.5 N.D. -0.1
carbon source 2'-Deoxyinosine 5 mM (C) +0.4 -0.3 -0.5 N.D. -0.0
carbon source Hydroxy-L-Proline (C) +0.3 -0.9 +0.3 N.D. -0.0
carbon source Sebacic (C) -1.0 +0.4 +0.4 N.D. -0.1
carbon source D-Glucose (C) +0.2 -0.8 +0.2 N.D. +0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.7 +0.6 +0.1 N.D. -0.1
carbon source 2'-Deoxyinosine 10 mM (C) -0.1 +0.5 -0.3 N.D. -0.3
carbon source 4-Hydroxybenzoic Acid (C) -0.8 +0.1 +0.5 N.D. +0.1
carbon source Malonic (C) +0.5 -0.2 -0.4 N.D. +0.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.5 +0.4 -0.3 N.D. -0.2
carbon source adipate (C) +0.3 -0.4 +0.6 N.D. +0.0
carbon source Valeric (C) -0.1 +0.5 +0.5 N.D. -0.2
carbon source Hexanoic (C) +0.2 +0.7 +0.2 N.D. +0.1
carbon source D-Glucose (C) +0.7 +0.2 +0.3 N.D. +0.0
carbon source adipate (C) +0.1 +0.1 +0.8 N.D. +0.2
carbon source succinate (C) -0.0 +0.5 +0.6 N.D. +0.1
carbon source succinate (C) +0.1 +0.6 +0.6 N.D. +0.3
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