Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 128 experiments or choose conditions or try the comparative fitness browser

500 ntH281DRAFT_01341 and H281DRAFT_01342 are separated by 46 nucleotidesH281DRAFT_01342 and H281DRAFT_01343 are separated by 40 nucleotidesH281DRAFT_01343 and H281DRAFT_01344 are separated by 72 nucleotidesH281DRAFT_01344 and H281DRAFT_01345 are separated by 28 nucleotides H281DRAFT_01341: H281DRAFT_01341 - Protein of unknown function (DUF1488), at 182,802 to 183,080 _01341 H281DRAFT_01342: H281DRAFT_01342 - ABC-type phosphate/phosphonate transport system, substrate-binding protein, at 183,127 to 183,918 _01342 H281DRAFT_01343: H281DRAFT_01343 - 3-methylcrotonoyl-CoA carboxylase, alpha subunit, at 183,959 to 185,992 _01343 H281DRAFT_01344: H281DRAFT_01344 - methylglutaconyl-CoA hydratase, at 186,065 to 186,850 _01344 H281DRAFT_01345: H281DRAFT_01345 - 3-methylcrotonyl-CoA carboxylase beta subunit, at 186,879 to 188,486 _01345
Group Condition H281DRAFT_01341 H281DRAFT_01342 H281DRAFT_01343 H281DRAFT_01344 H281DRAFT_01345
carbon source 4-Methyl-2-oxopentanoic (C) N.D. -0.4 -5.5 N.D. -4.8
carbon source 4-Methyl-2-oxopentanoic (C) N.D. -0.5 -2.8 N.D. -3.5
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.1 -1.8 N.D. -0.5
carbon source Phenylacetic (C) N.D. -0.3 -0.2 N.D. -1.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.2 -0.9 N.D. -0.4
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. +0.1 -0.3 N.D. -1.1
carbon source Phenylacetic (C) N.D. +0.3 -0.8 N.D. -0.7
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. -0.1 -0.2 N.D. -0.9
carbon source Gallic Acid (C) N.D. -0.3 -0.7 N.D. -0.1
phage Bu1_100 N.D. -0.5 -0.7 N.D. +0.0
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.2 -0.4 N.D. -0.5
carbon source Hexanoic (C) N.D. -0.5 -0.4 N.D. -0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. +0.3 -0.3 N.D. -0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.1 -0.8 N.D. -0.2
carbon source 2'-Deoxyinosine 10 mM (C) N.D. +0.3 -0.5 N.D. -0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. +0.4 -0.2 N.D. -0.6
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. +0.1 +0.6 N.D. -1.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. +0.4 -0.7 N.D. +0.0
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. +0.5 -0.3 N.D. -0.4
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. +0.6 -0.9 N.D. +0.0
carbon source 2-Deoxy-D-ribonic lithium salt (C) N.D. -0.4 +0.5 N.D. -0.3
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. +0.5 -0.7 N.D. +0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. +0.6 -0.3 N.D. -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM N.D. +0.7 -0.6 N.D. +0.1
carbon source Sebacic (C) N.D. +0.5 -0.3 N.D. +0.2
carbon source Azelaic (C) N.D. -0.2 +0.9 N.D. -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. +0.5 +0.9 N.D. -0.6
carbon source 2-Deoxy-D-Ribose 20 mM (C) N.D. +0.5 +0.6 N.D. -0.2
carbon source D,L-Lactate (C) N.D. +0.3 +0.8 N.D. +0.0
phage Bu1_10 N.D. +0.2 +0.7 N.D. +0.2
remove
H281DRAFT_01341
plot		 remove
H281DRAFT_01342
plot		 remove
H281DRAFT_01343		 remove
H281DRAFT_01344
plot		 remove
H281DRAFT_01345
plot