Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01315 and H281DRAFT_01316 are separated by 114 nucleotidesH281DRAFT_01316 and H281DRAFT_01317 are separated by 109 nucleotidesH281DRAFT_01317 and H281DRAFT_01318 are separated by 728 nucleotidesH281DRAFT_01318 and H281DRAFT_01319 are separated by 54 nucleotides H281DRAFT_01315: H281DRAFT_01315 - probable Rubsico expression protein CbbX, at 155,249 to 156,337 _01315 H281DRAFT_01316: H281DRAFT_01316 - ribulose 1,5-bisphosphate carboxylase small subunit, at 156,452 to 156,880 _01316 H281DRAFT_01317: H281DRAFT_01317 - ribulose 1,5-bisphosphate carboxylase large subunit, at 156,990 to 158,489 _01317 H281DRAFT_01318: H281DRAFT_01318 - hypothetical protein, at 159,218 to 159,802 _01318 H281DRAFT_01319: H281DRAFT_01319 - Uncharacterized protein, UPF0264 family, at 159,857 to 160,600 _01319
Group Condition H281DRAFT_01315 H281DRAFT_01316 H281DRAFT_01317 H281DRAFT_01318 H281DRAFT_01319
phage Bu1_100 -0.8 N.D. +0.0 -1.4 -0.7
carbon source Malonic (C) +0.2 N.D. +0.2 +0.4 -3.1
carbon source 4-Hydroxybenzoic Acid (C) +0.1 N.D. +0.0 +0.4 -1.8
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.5 N.D. +0.0 -0.9 +0.2
carbon source Phenylacetic (C) +0.2 N.D. +0.1 -0.8 -0.4
carbon source propionate (C) +0.1 N.D. -0.2 +0.4 -1.1
carbon source Protocatechuic Acid (C) -0.2 N.D. -0.1 +0.5 -0.8
carbon source 3-Hydroxypropionate (C) -0.0 N.D. +0.1 +0.6 -0.8
phage Bu1_10 +0.2 N.D. +0.5 -0.7 -0.1
carbon source 2'-Deoxyinosine 10 mM (C) -0.5 N.D. -0.2 +0.7 +0.2
carbon source succinate (C) +0.5 N.D. +0.4 -0.7 +0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.4 N.D. -0.2 +0.8 +0.2
carbon source Hexanoic (C) +0.1 N.D. -0.2 -0.8 +1.5
carbon source butyrate (C) -0.4 N.D. +0.1 -0.3 +1.2
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.3 N.D. -0.2 +0.8 +0.5
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.0 N.D. +0.2 -0.3 +0.9
carbon source D-Glucose (C) +0.5 N.D. +0.1 -0.3 +0.7
carbon source Gallic Acid (C) +0.4 N.D. +0.1 +0.9 -0.5
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +1.2 N.D. +1.3 -0.5 -0.8
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.0 N.D. +0.2 -0.3 +1.4
carbon source Protocatechuic Acid (C) -0.1 N.D. +0.2 +0.2 +1.0
carbon source 2'-Deoxyinosine 5 mM (C) -0.1 N.D. -0.4 +1.5 +0.5
carbon source Dodecandioic (C) +0.5 N.D. +0.3 +0.3 +0.5
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +1.1 N.D. +1.0 -0.2 -0.2
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.7 N.D. +1.6 -0.4 -0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.1 N.D. +0.2 +0.7 +0.8
carbon source adipate (C) +0.1 N.D. +0.0 +0.6 +1.1
carbon source acetate (C) +0.2 N.D. +0.2 +0.3 +1.2
carbon source Sebacic (C) +0.6 N.D. +0.1 +0.0 +1.5
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +1.2 N.D. +1.1 +0.7 +0.5
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