Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01226 and H281DRAFT_01227 are separated by 15 nucleotidesH281DRAFT_01227 and H281DRAFT_01228 are separated by 39 nucleotidesH281DRAFT_01228 and H281DRAFT_01229 are separated by 50 nucleotidesH281DRAFT_01229 and H281DRAFT_01230 are separated by 113 nucleotides H281DRAFT_01226: H281DRAFT_01226 - transcriptional regulator, LysR family, at 64,065 to 65,060 _01226 H281DRAFT_01227: H281DRAFT_01227 - L-rhamnose 1-dehydrogenase, at 65,076 to 65,858 _01227 H281DRAFT_01228: H281DRAFT_01228 - L-rhamnonate dehydratase, at 65,898 to 67,076 _01228 H281DRAFT_01229: H281DRAFT_01229 - Sugar phosphate permease, at 67,127 to 68,452 _01229 H281DRAFT_01230: H281DRAFT_01230 - 3-oxoacyl-[acyl-carrier protein] reductase, at 68,566 to 69,318 _01230
Group Condition H281DRAFT_01226 H281DRAFT_01227 H281DRAFT_01228 H281DRAFT_01229 H281DRAFT_01230
phage Bu1_10 N.D. -0.5 +0.1 -2.7 -0.5
phage Bu1_100 N.D. -0.7 -0.2 -0.9 -0.7
carbon source 2'-Deoxyinosine 10 mM (C) N.D. +0.0 -0.8 -0.9 -0.1
carbon source Dodecandioic (C) N.D. -0.4 -0.1 -0.6 -0.6
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. -0.2 -0.1 -1.3 -0.1
carbon source 2-Deoxy-D-Ribose 20 mM (C) N.D. -0.9 -0.2 -0.3 -0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. -0.1 -0.4 -0.9 +0.0
carbon source 2-Deoxy-D-Ribose 10 mM (C) N.D. +0.1 -0.7 -0.7 +0.1
carbon source D-Glucose (C) N.D. +0.2 +0.1 -0.7 -0.5
carbon source 2'-Deoxyinosine 10 mM (C) N.D. +0.3 -0.9 -0.2 -0.2
carbon source Protocatechuic Acid (C) N.D. +0.4 +0.1 -1.0 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -0.0 -0.3 +0.5 -0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +1.0 -0.1 -0.5 -0.6
phage Bu1_100 N.D. +0.6 -0.5 +0.2 -0.5
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.6 -0.3 +0.6 +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.2 -0.4 +0.8 -0.6
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.2 -0.5 +0.5 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.4 -0.2 +0.7 -0.5
carbon source D,L-Lactate (C) N.D. +0.3 -0.1 +0.7 -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.6 -0.1 +0.4 -0.4
carbon source Sebacic (C) N.D. +0.9 +0.1 -0.2 -0.3
carbon source Valeric (C) N.D. +0.5 +0.1 +0.5 -0.5
carbon source D,L-Lactate (C) N.D. +0.6 +0.0 +0.5 -0.4
carbon source Azelaic (C) N.D. +0.8 +0.3 +0.3 -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.6 -0.1 +0.7 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. +1.2 +0.1 -0.9 +0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +1.2 +0.0 +0.4 -0.6
carbon source 2-Deoxy-D-Ribose (C) N.D. +0.1 -0.4 +1.0 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.8 -0.2 +1.0 -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.5 -0.1 +1.5 +0.3
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