Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01182 and H281DRAFT_01183 are separated by 11 nucleotidesH281DRAFT_01183 and H281DRAFT_01184 are separated by 28 nucleotidesH281DRAFT_01184 and H281DRAFT_01185 are separated by 131 nucleotidesH281DRAFT_01185 and H281DRAFT_01186 are separated by 143 nucleotides H281DRAFT_01182: H281DRAFT_01182 - SnoaL-like domain-containing protein, at 18,877 to 19,449 _01182 H281DRAFT_01183: H281DRAFT_01183 - Sugar lactone lactonase YvrE, at 19,461 to 20,342 _01183 H281DRAFT_01184: H281DRAFT_01184 - 3-oxoacyl-[acyl-carrier protein] reductase, at 20,371 to 21,123 _01184 H281DRAFT_01185: H281DRAFT_01185 - MFS transporter, AAHS family, 4-hydroxybenzoate transporter, at 21,255 to 22,616 _01185 H281DRAFT_01186: H281DRAFT_01186 - DNA-binding transcriptional regulator, LysR family, at 22,760 to 23,671 _01186
Group Condition H281DRAFT_01182 H281DRAFT_01183 H281DRAFT_01184 H281DRAFT_01185 H281DRAFT_01186
phage Bu1_10 -0.4 -1.1 -1.7 -0.3 +0.2
carbon source Valeric (C) -0.3 -1.3 -0.4 +0.2 -0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.2 -0.6 -1.1 +0.1 +0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +0.1 -0.7 -0.6 -0.3
carbon source Malonic (C) +0.6 -0.2 -1.0 +0.2 -0.1
carbon source 2-furoic (C) -0.4 +0.6 -1.0 +0.4 +0.1
carbon source 2-Deoxy-D-Ribose (C) +0.3 -1.1 +0.5 +0.1 +0.2
phage Bu1_100 -0.0 +0.5 -1.1 +0.6 -0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.7 -0.4 -0.4 +0.4 -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 +1.2 -1.3 +0.2 -0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM +0.6 +0.2 -0.7 +0.6 +0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.4 -0.3 +1.6 +0.1 +0.0
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.3 +0.2 +1.6 -0.6 +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.0 +2.6 -0.5 -0.5 +0.1
carbon source D-Glucose 20 mM (C) -0.2 -0.3 +2.1 +0.0 +0.3
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.1 +0.3 +1.8 -0.0 +0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.1 +0.1 +1.5 -0.1 +0.4
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.1 -0.1 +1.6 +0.2 +0.3
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.4 -0.1 +1.4 +0.0 +0.4
carbon source D-Glucose 20 mM (C) +0.5 +0.3 +1.4 -0.5 +0.4
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.4 +0.2 +1.2 -0.0 +0.3
carbon source 2'-Deoxyinosine 10 mM (C) +0.0 +0.6 +1.6 -0.3 +0.2
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.6 -0.1 +1.2 +0.1 +0.6
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.5 +0.0 +1.1 +0.2 +0.4
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.1 +0.6 +1.5 -0.0 +0.2
carbon source 2'-Deoxyinosine 5 mM (C) -0.0 +0.6 +1.7 -0.2 +0.5
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.5 +0.3 +1.6 +0.1 +0.1
ecofab LB in EcoFAB_3.5mL +0.1 +0.7 +1.4 +0.2 +0.4
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.3 +0.9 +1.3 +0.0 +0.5
carbon source 2'-Deoxyinosine 10 mM (C) +0.3 +0.8 +1.4 +0.4 +0.3
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