Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01172 and H281DRAFT_01173 are separated by 655 nucleotidesH281DRAFT_01173 and H281DRAFT_01174 are separated by 388 nucleotidesH281DRAFT_01174 and H281DRAFT_01175 are separated by 182 nucleotidesH281DRAFT_01175 and H281DRAFT_01176 are separated by 163 nucleotides H281DRAFT_01172: H281DRAFT_01172 - NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family, at 5,177 to 5,965 _01172 H281DRAFT_01173: H281DRAFT_01173 - Outer membrane protein (porin), at 6,621 to 7,811 _01173 H281DRAFT_01174: H281DRAFT_01174 - Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase), at 8,200 to 9,261 _01174 H281DRAFT_01175: H281DRAFT_01175 - hypothetical protein, at 9,444 to 9,623 _01175 H281DRAFT_01176: H281DRAFT_01176 - fatty-acyl-CoA synthase, at 9,787 to 11,442 _01176
Group Condition H281DRAFT_01172 H281DRAFT_01173 H281DRAFT_01174 H281DRAFT_01175 H281DRAFT_01176
phage Bu1_100 N.D. -0.5 -0.2 N.D. -0.5
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. -0.8 +0.1 N.D. -0.2
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. -0.9 +0.2 N.D. -0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. -0.4 +0.1 N.D. -0.3
ecofab LB in EcoFAB_3.5mL N.D. -0.3 +0.2 N.D. -0.3
carbon source Hexanoic (C) N.D. -0.3 +0.3 N.D. -0.5
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. -0.3 +0.3 N.D. -0.4
carbon source Valeric (C) N.D. +0.3 -0.0 N.D. -0.7
carbon source D-Glucose 20 mM (C) N.D. -0.2 +0.3 N.D. -0.4
phage Bu1_10 N.D. +0.6 -0.5 N.D. -0.4
carbon source acetate (C) N.D. +0.4 -0.2 N.D. -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.5 -0.3 N.D. -0.2
carbon source 2'-Deoxyinosine 5 mM (C) N.D. -0.0 +0.5 N.D. -0.4
carbon source Valeric (C) N.D. -0.4 +0.5 N.D. -0.0
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. -0.0 +0.5 N.D. -0.3
carbon source 2-Deoxy-D-Ribose (C) N.D. -0.4 +0.5 N.D. +0.1
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) N.D. +0.1 +0.6 N.D. -0.4
carbon source D-Glucose (C) N.D. +0.3 +0.3 N.D. -0.3
carbon source Protocatechuic Acid (C) N.D. +0.4 +0.2 N.D. -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.6 -0.5 N.D. +0.3
carbon source 2-Deoxy-D-Ribose 20 mM (C) N.D. +0.2 +0.5 N.D. -0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. +0.3 -0.4 N.D. +0.6
carbon source succinate (C) N.D. +0.4 +0.4 N.D. -0.3
carbon source Hexanoic (C) N.D. +0.4 +0.6 N.D. -0.5
carbon source adipate (C) N.D. +0.4 +0.5 N.D. -0.3
carbon source D-Glucose (C) N.D. +0.5 +0.3 N.D. -0.2
carbon source Suberic (C) N.D. +0.4 +0.4 N.D. -0.2
carbon source 2-Deoxy-D-Ribose 10 mM (C) N.D. +0.3 +0.5 N.D. -0.2
carbon source Malonic (C) N.D. +0.4 +0.4 N.D. -0.1
carbon source propionate (C) N.D. +0.5 +0.4 N.D. +0.2
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