Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01163 and H281DRAFT_01164 are separated by 83 nucleotidesH281DRAFT_01164 and H281DRAFT_01165 are separated by 120 nucleotidesH281DRAFT_01165 and H281DRAFT_01166 are separated by 156 nucleotidesH281DRAFT_01166 and H281DRAFT_01167 are separated by 252 nucleotides H281DRAFT_01163: H281DRAFT_01163 - hypothetical protein, at 1,311,938 to 1,312,306 _01163 H281DRAFT_01164: H281DRAFT_01164 - hypothetical protein, at 1,312,390 to 1,312,659 _01164 H281DRAFT_01165: H281DRAFT_01165 - hypothetical protein, at 1,312,780 to 1,313,031 _01165 H281DRAFT_01166: H281DRAFT_01166 - p-hydroxybenzoate 3-monooxygenase, at 1,313,188 to 1,314,366 _01166 H281DRAFT_01167: H281DRAFT_01167 - threonine ammonia-lyase, biosynthetic, long form, at 1,314,619 to 1,315,464 _01167
Group Condition H281DRAFT_01163 H281DRAFT_01164 H281DRAFT_01165 H281DRAFT_01166 H281DRAFT_01167
carbon source 4-Hydroxybenzoic Acid (C) -0.4 N.D. -0.3 -5.3 -0.9
carbon source p-Coumaric (C) +0.3 N.D. -0.5 -3.4 -0.3
carbon source p-Coumaric (C) -0.1 N.D. -0.0 -3.4 +0.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.6 N.D. -1.3 -0.6 -0.5
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -1.3 N.D. -0.8 -0.6 +0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.8 N.D. -0.2 -0.6 -0.9
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.4 N.D. -0.9 -0.7 -0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.9 N.D. -0.6 -0.4 -0.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM +0.1 N.D. -1.1 -0.6 -0.4
carbon source Sebacic (C) -0.4 N.D. -0.7 +0.2 -1.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.8 N.D. -0.0 -0.7 -0.4
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -1.0 N.D. -0.1 -0.2 -0.6
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.1 N.D. -1.1 -0.1 -0.6
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM -0.3 N.D. -0.5 -0.7 -0.3
carbon source adipate (C) -1.1 N.D. -0.1 +0.2 -0.8
carbon source butyrate (C) -0.5 N.D. -0.5 -0.1 -0.5
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.4 N.D. -1.2 +0.1 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -1.1 N.D. +0.0 -0.5 +0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM -0.5 N.D. -0.2 -0.4 -0.4
carbon source Phenylacetic (C) +0.5 N.D. -0.9 -0.3 -0.5
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.1 N.D. -0.9 +0.3 -0.6
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.5 N.D. -0.7 -0.3 +0.7
carbon source Azelaic (C) -0.1 N.D. -0.6 +0.4 -0.4
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.9 N.D. +0.1 -0.2 +0.3
carbon source 2-Deoxy-D-Ribose (C) -0.6 N.D. +0.5 -0.1 -0.4
phage Bu1_100 -0.3 N.D. +0.5 +0.3 -0.7
carbon source Valeric (C) -0.0 N.D. +0.6 +0.3 -0.9
carbon source Valeric (C) +0.1 N.D. +0.5 +0.3 -0.8
carbon source Protocatechuic Acid (C) -0.1 N.D. +0.6 +0.4 -0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 N.D. +0.7 -0.4 +0.4
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