Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01161 and H281DRAFT_01162 are separated by 476 nucleotidesH281DRAFT_01162 and H281DRAFT_01163 are separated by 54 nucleotidesH281DRAFT_01163 and H281DRAFT_01164 are separated by 83 nucleotidesH281DRAFT_01164 and H281DRAFT_01165 are separated by 120 nucleotides H281DRAFT_01161: H281DRAFT_01161 - cytochrome b561, at 1,310,730 to 1,311,284 _01161 H281DRAFT_01162: H281DRAFT_01162 - hypothetical protein, at 1,311,761 to 1,311,883 _01162 H281DRAFT_01163: H281DRAFT_01163 - hypothetical protein, at 1,311,938 to 1,312,306 _01163 H281DRAFT_01164: H281DRAFT_01164 - hypothetical protein, at 1,312,390 to 1,312,659 _01164 H281DRAFT_01165: H281DRAFT_01165 - hypothetical protein, at 1,312,780 to 1,313,031 _01165
Group Condition H281DRAFT_01161 H281DRAFT_01162 H281DRAFT_01163 H281DRAFT_01164 H281DRAFT_01165
carbon source butyrate (C) -0.9 N.D. -0.5 N.D. -0.5
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.9 N.D. -0.1 N.D. -0.9
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.1 N.D. -0.6 N.D. -1.3
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.1 N.D. -0.4 N.D. -1.2
carbon source adipate (C) -0.5 N.D. -1.1 N.D. -0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.4 N.D. -1.3 N.D. -0.8
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.4 N.D. -0.1 N.D. -1.1
ecofab LB in EcoFAB_3.5mL -0.7 N.D. -0.4 N.D. -0.4
carbon source propionate (C) -1.0 N.D. -0.5 N.D. +0.2
carbon source Sebacic (C) -0.3 N.D. -0.4 N.D. -0.7
carbon source Azelaic (C) -0.6 N.D. -0.1 N.D. -0.6
carbon source Hydroxy-L-Proline (C) -0.7 N.D. -0.4 N.D. -0.1
carbon source propionate (C) +0.1 N.D. -0.2 N.D. -1.0
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM +0.2 N.D. -0.4 N.D. -0.9
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 N.D. -0.9 N.D. +0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.0 N.D. -1.1 N.D. +0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 N.D. -0.3 N.D. +0.3
carbon source Protocatechuic Acid (C) -0.9 N.D. -0.2 N.D. +0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.1 N.D. -1.0 N.D. -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.1 N.D. +0.3 N.D. -0.2
carbon source Hexanoic (C) -0.9 N.D. +0.2 N.D. -0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM +0.3 N.D. +0.1 N.D. -1.1
carbon source Phenylacetic (C) -0.3 N.D. +0.5 N.D. -0.9
carbon source 3-hydroxybutyric (C) -0.5 N.D. +0.4 N.D. -0.5
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.6 N.D. -0.5 N.D. -0.7
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM +0.9 N.D. -0.9 N.D. -0.6
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.6 N.D. -0.8 N.D. -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM +0.6 N.D. -0.3 N.D. -0.5
phage Bu1_100 +0.8 N.D. -0.3 N.D. +0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.0 N.D. +0.5 N.D. +0.7
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