Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01154 and H281DRAFT_01155 are separated by 325 nucleotidesH281DRAFT_01155 and H281DRAFT_01156 are separated by 108 nucleotidesH281DRAFT_01156 and H281DRAFT_01157 are separated by 41 nucleotidesH281DRAFT_01157 and H281DRAFT_01158 are separated by 311 nucleotides H281DRAFT_01154: H281DRAFT_01154 - cold-shock DNA-binding protein family, at 1,303,772 to 1,303,975 _01154 H281DRAFT_01155: H281DRAFT_01155 - 2,5-dioxopentanoate dehydrogenase (NAD+), at 1,304,301 to 1,305,746 _01155 H281DRAFT_01156: H281DRAFT_01156 - Protein N-acetyltransferase, RimJ/RimL family, at 1,305,855 to 1,306,433 _01156 H281DRAFT_01157: H281DRAFT_01157 - 2-keto-3-deoxygluconate permease, at 1,306,475 to 1,307,491 _01157 H281DRAFT_01158: H281DRAFT_01158 - 4-deoxy-L-threo-5-hexulose uronate isomerase, at 1,307,803 to 1,308,639 _01158
Group Condition H281DRAFT_01154 H281DRAFT_01155 H281DRAFT_01156 H281DRAFT_01157 H281DRAFT_01158
carbon source Malonic (C) N.D. N.D. -1.0 N.D. -0.1
carbon source adipate (C) N.D. N.D. -0.7 N.D. -0.4
carbon source Gallic Acid (C) N.D. N.D. -0.6 N.D. -0.5
carbon source Hexanoic (C) N.D. N.D. -0.4 N.D. -0.7
carbon source butyrate (C) N.D. N.D. -0.7 N.D. -0.3
carbon source adipate (C) N.D. N.D. -0.7 N.D. -0.2
carbon source acetate (C) N.D. N.D. -1.1 N.D. +0.2
carbon source propionate (C) N.D. N.D. -0.8 N.D. -0.1
carbon source D-Glucose (C) N.D. N.D. -0.4 N.D. -0.3
carbon source 3-hydroxybutyric (C) N.D. N.D. -0.3 N.D. -0.4
carbon source Malonic (C) N.D. N.D. -0.5 N.D. -0.2
carbon source Sebacic (C) N.D. N.D. -0.5 N.D. -0.2
carbon source Protocatechuic Acid (C) N.D. N.D. -0.4 N.D. -0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. -0.5 N.D. -0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. N.D. +0.2 N.D. -0.7
carbon source Suberic (C) N.D. N.D. -0.6 N.D. +0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. N.D. +0.2 N.D. -0.5
carbon source Dodecandioic (C) N.D. N.D. -0.4 N.D. +0.2
control NoPhageControl N.D. N.D. -0.5 N.D. +0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM N.D. N.D. +0.4 N.D. -0.4
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. N.D. +0.3 N.D. -0.3
carbon source 2'-Deoxyinosine 10 mM (C) N.D. N.D. +0.5 N.D. -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM N.D. N.D. +0.6 N.D. -0.2
phage Bu1_10 N.D. N.D. +0.9 N.D. -0.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. N.D. +0.7 N.D. -0.2
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. N.D. +0.4 N.D. +0.3
carbon source D-Glucose 20 mM (C) N.D. N.D. +0.5 N.D. +0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. N.D. +0.7 N.D. +0.2
phage Bu1_100 N.D. N.D. +1.2 N.D. -0.2
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. N.D. +0.9 N.D. +0.2
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