Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	H281DRAFT_01115	H281DRAFT_01116	H281DRAFT_01117	H281DRAFT_01118	H281DRAFT_01119
carbon source	2'-Deoxyinosine 5 mM (C)	-3.5	-6.5	-2.7	N.D.	-0.1
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	-2.8	-3.4	-3.6	N.D.	-0.9
carbon source	2'-Deoxyinosine 5 mM (C)	-2.5	-2.9	-3.7	N.D.	-0.2
carbon source	2-Deoxyadenosine 5-monophosphate 5 mM (C)	-3.4	-2.4	-2.5	N.D.	-0.8
carbon source	2'-Deoxyinosine 10 mM (C)	-2.5	-1.9	-1.9	N.D.	-0.2
carbon source	2'-Deoxyinosine 10 mM (C)	-2.5	-2.4	-1.6	N.D.	+0.1
carbon source	2-Deoxyadenosine 5-monophosphate 2.5 mM (C)	-2.1	-1.8	-2.0	N.D.	-0.4
carbon source	2-Deoxyadenosine 5-monophosphate 2.5 mM (C)	-1.9	-1.8	-1.8	N.D.	-0.2
carbon source	2-Deoxy-D-Ribose (C)	+2.4	-3.5	-4.0	N.D.	-0.1
carbon source	2-Deoxy-D-Ribose (C)	+2.0	-3.4	-3.6	N.D.	+0.2
carbon source	2-Deoxy-D-Ribose 10 mM (C)	+1.2	-2.8	-2.9	N.D.	+0.3
carbon source	2-Deoxy-D-Ribose 10 mM (C)	+0.9	-2.6	-2.4	N.D.	+0.1
carbon source	2-Deoxy-D-Ribose (C)	+1.5	-2.8	-2.8	N.D.	+0.1
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.7	-0.7	-0.9	N.D.	+0.4
carbon source	2-Deoxy-D-Ribose 20 mM (C)	+0.3	-0.8	-1.3	N.D.	+0.0
supernatant	RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x	-0.7	-0.3	-0.6	N.D.	-0.1
carbon source	2-Deoxy-D-Ribose (C)	+1.9	-2.0	-1.9	N.D.	+0.3
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	+0.1	-0.2	-1.4	N.D.	-0.1
carbon source	Deoxyribonucleic from herring sperm 10 mg/mL (C)	-0.6	+0.3	-0.8	N.D.	-0.2
carbon source	butyrate (C)	-0.8	+0.1	+0.1	N.D.	-0.6
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	+0.5	-0.6	-0.4	N.D.	-0.3
carbon source	2-Deoxy-D-Ribose 20 mM (C)	+0.3	-0.6	-0.8	N.D.	+0.2
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days	+0.5	-0.9	-0.2	N.D.	-0.1
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM	-0.6	+0.6	-0.2	N.D.	-0.3
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM	-0.4	+0.5	-0.5	N.D.	+0.2
carbon source	Dodecandioic (C)	-0.6	-0.3	+0.7	N.D.	+0.0
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM	-0.6	+0.9	-0.2	N.D.	-0.3
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	-0.6	+0.8	-0.1	N.D.	+0.2
phage	Bu1_100	+0.4	+0.1	+0.7	N.D.	-0.3
phage	Bu1_100	+0.4	+0.4	+0.9	N.D.	-0.2