Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01112 and H281DRAFT_01113 are separated by 15 nucleotidesH281DRAFT_01113 and H281DRAFT_01114 are separated by 60 nucleotidesH281DRAFT_01114 and H281DRAFT_01115 are separated by 101 nucleotidesH281DRAFT_01115 and H281DRAFT_01116 are separated by 34 nucleotides H281DRAFT_01112: H281DRAFT_01112 - deoxynucleoside transporter, permease component 2 (from data), at 1,251,300 to 1,252,394 _01112 H281DRAFT_01113: H281DRAFT_01113 - deoxynucleoside transporter, ATPase component (from data), at 1,252,410 to 1,253,957 _01113 H281DRAFT_01114: H281DRAFT_01114 - deoxynucleoside transporter, substrate-binding component (from data), at 1,254,018 to 1,255,022 _01114 H281DRAFT_01115: H281DRAFT_01115 - deoxynucleoside transporter, permease component 1 (from data), at 1,255,124 to 1,256,197 _01115 H281DRAFT_01116: H281DRAFT_01116 - deoxyribose kinase (EC 2.7.1.15) (from data), at 1,256,232 to 1,257,194 _01116
Group Condition H281DRAFT_01112 H281DRAFT_01113 H281DRAFT_01114 H281DRAFT_01115 H281DRAFT_01116
carbon source 2'-Deoxyinosine 5 mM (C) -0.9 N.D. -2.7 -3.5 -6.5
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -2.6 N.D. -2.0 -2.8 -3.4
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -3.2 N.D. -1.6 -3.4 -2.4
carbon source 2'-Deoxyinosine 5 mM (C) -2.2 N.D. -1.8 -2.5 -2.9
carbon source 2'-Deoxyinosine 10 mM (C) -1.3 N.D. -2.1 -2.5 -2.4
carbon source 2'-Deoxyinosine 10 mM (C) -1.9 N.D. -1.4 -2.5 -1.9
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -1.6 N.D. -1.9 -1.9 -1.8
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.9 N.D. -1.9 -2.1 -1.8
carbon source Dodecandioic (C) +0.1 N.D. -1.1 -0.6 -0.3
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.2 N.D. -0.6 -0.7 -0.7
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.3 N.D. -0.4 -0.6 +0.3
phage Bu1_100 -0.0 N.D. -1.6 +0.4 +0.4
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.4 N.D. -0.5 +0.5 -0.9
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.0 N.D. -0.6 -0.6 +0.6
carbon source Malonic (C) -0.4 N.D. -0.6 -0.1 +0.6
carbon source adipate (C) -0.3 N.D. +0.7 -0.5 -0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.1 N.D. -0.1 -0.6 +0.8
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.7 N.D. +0.3 +0.3 -0.8
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM +0.1 N.D. +0.0 -0.6 +0.9
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.2 N.D. +0.7 +0.5 -0.6
carbon source 2-Deoxy-D-Ribose (C) +0.8 N.D. +1.1 +1.5 -2.8
carbon source 2-Deoxy-D-Ribose 10 mM (C) +1.5 N.D. +1.0 +0.9 -2.6
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.6 N.D. +0.5 +0.3 -0.6
carbon source 2-Deoxy-D-Ribose 10 mM (C) +1.4 N.D. +1.1 +1.2 -2.8
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.7 N.D. +0.3 -0.4 +0.5
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.3 N.D. +0.2 -0.0 +1.0
phage Bu1_100 +1.0 N.D. +0.2 +0.4 +0.1
carbon source 2-Deoxy-D-Ribose (C) +1.6 N.D. +1.9 +2.0 -3.4
carbon source 2-Deoxy-D-Ribose (C) +1.6 N.D. +1.9 +2.4 -3.5
carbon source 2-Deoxy-D-Ribose (C) +1.0 N.D. +1.5 +1.9 -2.0
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