Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01110 and H281DRAFT_01111 are separated by 285 nucleotidesH281DRAFT_01111 and H281DRAFT_01112 are separated by 109 nucleotidesH281DRAFT_01112 and H281DRAFT_01113 are separated by 15 nucleotidesH281DRAFT_01113 and H281DRAFT_01114 are separated by 60 nucleotides H281DRAFT_01110: H281DRAFT_01110 - Protein of unknown function (DUF2934), at 1,249,880 to 1,250,179 _01110 H281DRAFT_01111: H281DRAFT_01111 - transcriptional regulator, DeoR family, at 1,250,465 to 1,251,190 _01111 H281DRAFT_01112: H281DRAFT_01112 - deoxynucleoside transporter, permease component 2 (from data), at 1,251,300 to 1,252,394 _01112 H281DRAFT_01113: H281DRAFT_01113 - deoxynucleoside transporter, ATPase component (from data), at 1,252,410 to 1,253,957 _01113 H281DRAFT_01114: H281DRAFT_01114 - deoxynucleoside transporter, substrate-binding component (from data), at 1,254,018 to 1,255,022 _01114
Group Condition H281DRAFT_01110 H281DRAFT_01111 H281DRAFT_01112 H281DRAFT_01113 H281DRAFT_01114
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. -0.1 -3.2 N.D. -1.6
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. -0.0 -2.6 N.D. -2.0
carbon source 2'-Deoxyinosine 5 mM (C) N.D. +0.2 -0.9 N.D. -2.7
carbon source 2'-Deoxyinosine 10 mM (C) N.D. +0.3 -1.9 N.D. -1.4
carbon source D-Glucose (C) N.D. -2.2 -0.1 N.D. -0.5
carbon source 2'-Deoxyinosine 5 mM (C) N.D. +1.2 -2.2 N.D. -1.8
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. +0.9 -1.6 N.D. -1.9
carbon source butyrate (C) N.D. -2.5 -0.1 N.D. +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -1.7 -0.6 N.D. -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -2.4 +0.1 N.D. -0.0
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. +0.7 -0.9 N.D. -1.9
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -2.0 -0.0 N.D. -0.0
carbon source Glycerol (C) N.D. -1.3 -0.6 N.D. -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -1.2 -0.2 N.D. -0.5
carbon source 2'-Deoxyinosine 10 mM (C) N.D. +1.7 -1.3 N.D. -2.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. -1.7 +0.4 N.D. -0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. -1.7 +0.4 N.D. +0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. -1.2 -0.6 N.D. +0.5
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. -1.3 +0.2 N.D. +0.5
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. -1.1 +0.7 N.D. +0.3
carbon source 4-Hydroxybenzoic Acid (C) N.D. +1.8 +0.3 N.D. -0.9
carbon source adipate (C) N.D. +0.9 -0.3 N.D. +0.7
phage Bu1_10 N.D. +1.4 -0.1 N.D. +0.3
carbon source 2-Deoxy-D-Ribose 10 mM (C) N.D. +0.1 +1.5 N.D. +1.0
carbon source 2-Deoxy-D-Ribose 10 mM (C) N.D. +0.4 +1.4 N.D. +1.1
phage Bu1_100 N.D. +1.8 +1.0 N.D. +0.2
carbon source 2-Deoxy-D-Ribose (C) N.D. +1.1 +0.8 N.D. +1.1
carbon source 2-Deoxy-D-Ribose (C) N.D. +0.6 +1.0 N.D. +1.5
carbon source 2-Deoxy-D-Ribose (C) N.D. +0.8 +1.6 N.D. +1.9
carbon source 2-Deoxy-D-Ribose (C) N.D. +1.3 +1.6 N.D. +1.9
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