Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01092 and H281DRAFT_01093 are separated by 47 nucleotidesH281DRAFT_01093 and H281DRAFT_01094 are separated by 113 nucleotidesH281DRAFT_01094 and H281DRAFT_01095 are separated by 72 nucleotidesH281DRAFT_01095 and H281DRAFT_01096 are separated by 11 nucleotides H281DRAFT_01092: H281DRAFT_01092 - transcriptional regulator, LysR family, at 1,225,149 to 1,226,090 _01092 H281DRAFT_01093: H281DRAFT_01093 - transcriptional regulator, winged helix family, at 1,226,138 to 1,229,152 _01093 H281DRAFT_01094: H281DRAFT_01094 - protein of unknown function (DUF3331), at 1,229,266 to 1,229,781 _01094 H281DRAFT_01095: H281DRAFT_01095 - Glyoxylase, beta-lactamase superfamily II, at 1,229,854 to 1,230,843 _01095 H281DRAFT_01096: H281DRAFT_01096 - thioredoxin reductase (NADPH), at 1,230,855 to 1,232,582 _01096
Group Condition H281DRAFT_01092 H281DRAFT_01093 H281DRAFT_01094 H281DRAFT_01095 H281DRAFT_01096
phage Bu1_10 -0.9 -0.3 -0.1 -0.8 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.4 +0.1 +0.1 -2.5 N.D.
carbon source Hexanoic (C) -0.1 +0.4 +0.0 -2.1 N.D.
carbon source L-Glutamic (C) -0.2 -0.1 -0.8 -0.6 N.D.
carbon source Malonic (C) +0.0 +0.6 -1.1 -0.6 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.6 +0.3 -1.2 +0.5 N.D.
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.2 +0.2 -0.8 -0.3 N.D.
carbon source D-Glucose 20 mM (C) -0.2 +0.5 -1.0 +0.1 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM +0.5 -0.1 -0.0 -0.9 N.D.
carbon source 2'-Deoxyinosine 5 mM (C) +0.4 +0.4 -0.6 -0.3 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.7 +0.4 -0.7 -0.3 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.2 +0.6 -0.8 -0.0 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.3 +0.1 -0.4 +0.6 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.2 +0.3 -0.7 +0.7 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.2 +0.3 -0.5 +0.6 N.D.
carbon source 2-furoic (C) +0.4 -0.1 -0.6 +0.4 N.D.
carbon source 2'-Deoxyinosine 10 mM (C) +0.4 +0.4 -0.9 +0.4 N.D.
carbon source 2'-Deoxyinosine 10 mM (C) +0.5 -0.5 -0.4 +0.8 N.D.
carbon source butyrate (C) +0.6 +0.1 +0.7 -0.7 N.D.
carbon source butyrate (C) +0.5 -0.1 +0.7 -0.5 N.D.
carbon source D,L-Lactate (C) +0.5 -0.0 +0.8 -0.6 N.D.
ecofab LB in EcoFAB_3.5mL +0.3 +0.2 -0.5 +0.7 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 +0.4 +1.0 -0.3 N.D.
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.7 +0.5 -0.6 +0.3 N.D.
carbon source Phenylacetic (C) +0.2 +0.0 -0.2 +1.0 N.D.
carbon source Protocatechuic Acid (C) +0.2 +0.5 +0.6 -0.2 N.D.
carbon source 3-hydroxybutyric (C) -0.1 +0.0 +0.5 +0.9 N.D.
carbon source D-Glucose (C) +0.2 -0.1 -0.0 +1.2 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +1.0 +0.8 -0.0 +0.5 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.8 +0.4 +0.3 +0.9 N.D.
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