Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01038 and H281DRAFT_01039 overlap by 4 nucleotidesH281DRAFT_01039 and H281DRAFT_01040 are separated by 2 nucleotidesH281DRAFT_01040 and H281DRAFT_01041 are separated by 22 nucleotidesH281DRAFT_01041 and H281DRAFT_01042 are separated by 23 nucleotides H281DRAFT_01038: H281DRAFT_01038 - methylmalonyl-CoA mutase, at 1,167,404 to 1,169,515 _01038 H281DRAFT_01039: H281DRAFT_01039 - probable biosynthetic protein, Pnap_2097 family, at 1,169,512 to 1,170,327 _01039 H281DRAFT_01040: H281DRAFT_01040 - putative flavoprotein involved in K+ transport, at 1,170,330 to 1,171,622 _01040 H281DRAFT_01041: H281DRAFT_01041 - MSMEG_0570 family protein, at 1,171,645 to 1,171,929 _01041 H281DRAFT_01042: H281DRAFT_01042 - glycosyltransferase, MSMEG_0565 family, at 1,171,953 to 1,173,125 _01042
Group Condition H281DRAFT_01038 H281DRAFT_01039 H281DRAFT_01040 H281DRAFT_01041 H281DRAFT_01042
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.5 -0.2 +0.1 N.D. -1.2
carbon source Valeric (C) -0.4 -1.7 -0.3 N.D. +0.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.0 -0.4 +0.3 N.D. -1.1
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.3 -0.7 -0.3 N.D. -0.5
carbon source Protocatechuic Acid (C) +0.1 +0.1 +0.0 N.D. -1.5
carbon source p-Coumaric (C) -0.0 +0.0 +0.2 N.D. -1.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.6 -0.3 +0.3 N.D. -0.4
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.2 -1.5 +0.2 N.D. +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -0.6 +0.4 N.D. +0.4
carbon source butyrate (C) -0.5 +0.1 -1.2 N.D. +0.9
carbon source Malonic (C) -0.3 +0.5 -0.4 N.D. -0.4
carbon source Protocatechuic Acid (C) -0.9 -0.2 -0.1 N.D. +0.7
phage Bu1_10 -0.8 -0.1 +0.4 N.D. +0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.9 -0.5 +0.1 N.D. -0.7
phage Bu1_100 -0.1 -0.7 +0.6 N.D. -0.2
carbon source D-Glucose (C) +0.7 -0.1 -0.4 N.D. -0.4
carbon source Valeric (C) -0.5 -0.4 +0.3 N.D. +0.5
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.3 -0.4 +0.6 N.D. -0.4
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x +0.1 -0.8 +0.3 N.D. +0.4
carbon source 4-Hydroxybenzoic Acid (C) +0.8 -0.7 -0.6 N.D. +0.5
carbon source Sebacic (C) -0.7 +0.0 -0.1 N.D. +1.5
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.2 -0.7 +0.4 N.D. +0.8
carbon source Hexanoic (C) -0.8 +0.8 -0.2 N.D. +1.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.1 -0.3 +0.3 N.D. -0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.3 +0.6 +0.7 N.D. -0.1
carbon source adipate (C) -0.0 -0.5 +0.5 N.D. +0.9
carbon source Dodecandioic (C) -0.7 +0.2 +0.0 N.D. +1.3
carbon source succinate (C) -0.3 +0.1 +0.3 N.D. +0.9
carbon source acetate (C) -0.2 +0.2 +0.1 N.D. +1.4
carbon source Malonic (C) -0.3 +0.4 +0.4 N.D. +1.2
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