Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 128 experiments or choose conditions or try the comparative fitness browser

500 ntH281DRAFT_01031 and H281DRAFT_01032 overlap by 4 nucleotidesH281DRAFT_01032 and H281DRAFT_01033 are separated by 127 nucleotidesH281DRAFT_01033 and H281DRAFT_01034 are separated by 33 nucleotidesH281DRAFT_01034 and H281DRAFT_01035 are separated by 630 nucleotides H281DRAFT_01031: H281DRAFT_01031 - peptide/nickel transport system ATP-binding protein, at 1,158,805 to 1,159,938 _01031 H281DRAFT_01032: H281DRAFT_01032 - peptide/nickel transport system ATP-binding protein, at 1,159,935 to 1,160,957 _01032 H281DRAFT_01033: H281DRAFT_01033 - DNA-binding transcriptional regulator, LysR family, at 1,161,085 to 1,161,966 _01033 H281DRAFT_01034: H281DRAFT_01034 - Outer membrane protein (porin), at 1,162,000 to 1,162,827 _01034 H281DRAFT_01035: H281DRAFT_01035 - TPR repeat-containing protein, at 1,163,458 to 1,164,300 _01035
Group Condition H281DRAFT_01031 H281DRAFT_01032 H281DRAFT_01033 H281DRAFT_01034 H281DRAFT_01035
carbon source 2-Deoxy-D-Ribose (C) -0.8 +0.0 +0.1 -0.1 -1.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM -0.2 +0.5 -1.0 -0.3 -0.6
phage Bu1_10 -0.7 +0.1 +1.3 -0.3 -1.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.0 +0.6 -0.4 -0.5 -0.6
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.4 +0.3 -0.2 +0.3 -0.6
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.3 +0.2 +0.5 -0.1 -0.9
phage Bu1_100 -0.7 -0.3 +0.4 +0.4 -0.4
carbon source adipate (C) -1.2 +0.7 +0.3 +0.1 -0.3
carbon source D,L-Lactate (C) -0.7 -0.3 +0.7 -0.1 -0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.7 +0.1 +0.5 +0.3 -0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.7 -0.4 +0.5 +0.7 -0.3
carbon source Hexanoic (C) +0.1 +0.5 -0.2 +0.3 -0.8
carbon source Hexanoic (C) +0.7 -0.2 +0.3 -0.1 -0.7
carbon source 2-Deoxy-D-Ribose (C) -0.5 -0.2 +1.0 -0.0 -0.3
carbon source 2-Deoxy-D-Ribose 20 mM (C) -0.4 -0.4 +0.9 +0.1 +0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 +0.5 +0.5 -0.1 -1.0
carbon source butyrate (C) +0.5 +0.6 +0.2 -0.0 -0.9
carbon source Dodecandioic (C) -0.4 +0.4 +0.8 +0.1 -0.4
carbon source Valeric (C) -0.4 +0.4 +0.9 -0.1 -0.1
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.4 +0.4 +0.4 +0.5 -0.2
carbon source acetate (C) +0.4 +0.6 +0.5 -0.2 -0.4
phage Bu1_100 -0.4 -0.2 +1.0 +0.1 +0.3
carbon source butyrate (C) -0.7 +0.5 +1.0 +0.1 +0.0
carbon source succinate (C) +0.4 +0.0 +0.8 +0.2 -0.5
carbon source Azelaic (C) +0.6 -0.0 +0.5 +0.5 -0.4
carbon source Malonic (C) +0.2 +0.3 +1.0 -0.3 -0.0
carbon source 2'-Deoxyinosine 10 mM (C) -0.0 -0.1 +1.4 +0.0 +0.4
carbon source propionate (C) +0.3 +0.6 +0.8 -0.0 +0.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +2.0 +0.2 +0.3 +0.0 -0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +1.8 +0.3 +0.2 +0.3 +0.2
remove
H281DRAFT_01031
plot		 remove
H281DRAFT_01032
plot		 remove
H281DRAFT_01033		 remove
H281DRAFT_01034
plot		 remove
H281DRAFT_01035
plot