Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_01012 and H281DRAFT_01013 are separated by 33 nucleotidesH281DRAFT_01013 and H281DRAFT_01014 are separated by 66 nucleotidesH281DRAFT_01014 and H281DRAFT_01015 are separated by 96 nucleotidesH281DRAFT_01015 and H281DRAFT_01016 are separated by 140 nucleotides H281DRAFT_01012: H281DRAFT_01012 - Ribosomal protein S18 acetylase RimI, at 1,138,424 to 1,138,873 _01012 H281DRAFT_01013: H281DRAFT_01013 - hypothetical protein, at 1,138,907 to 1,139,377 _01013 H281DRAFT_01014: H281DRAFT_01014 - glutathione S-transferase, at 1,139,444 to 1,140,139 _01014 H281DRAFT_01015: H281DRAFT_01015 - uncharacterized peroxidase-related enzyme, at 1,140,236 to 1,140,781 _01015 H281DRAFT_01016: H281DRAFT_01016 - Nitroreductase, at 1,140,922 to 1,141,557 _01016
Group Condition H281DRAFT_01012 H281DRAFT_01013 H281DRAFT_01014 H281DRAFT_01015 H281DRAFT_01016
carbon source 3-Hydroxypropionate (C) N.D. N.D. N.D. N.D. -0.6
carbon source D-Galactose (C) N.D. N.D. N.D. N.D. -0.6
carbon source Azelaic (C) N.D. N.D. N.D. N.D. -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. -0.5
carbon source Protocatechuic Acid (C) N.D. N.D. N.D. N.D. -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. -0.4
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. N.D. N.D. N.D. -0.4
carbon source butyrate (C) N.D. N.D. N.D. N.D. -0.3
carbon source Hydroxy-L-Proline (C) N.D. N.D. N.D. N.D. -0.3
carbon source 2'-Deoxyinosine 10 mM (C) N.D. N.D. N.D. N.D. -0.3
carbon source Glycerol (C) N.D. N.D. N.D. N.D. -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. N.D. N.D. -0.3
carbon source Phenylacetic (C) N.D. N.D. N.D. N.D. -0.3
carbon source p-Coumaric (C) N.D. N.D. N.D. N.D. -0.3
phage Bu1_10 N.D. N.D. N.D. N.D. -0.3
carbon source 2-Deoxy-D-Ribose 10 mM (C) N.D. N.D. N.D. N.D. -0.3
carbon source Protocatechuic Acid (C) N.D. N.D. N.D. N.D. +0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM N.D. N.D. N.D. N.D. +0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. N.D. N.D. +0.3
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. N.D. N.D. N.D. +0.3
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. N.D. N.D. N.D. +0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. N.D. N.D. N.D. +0.3
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. N.D. N.D. +0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. N.D. N.D. N.D. +0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. N.D. N.D. N.D. +0.4
carbon source Valeric (C) N.D. N.D. N.D. N.D. +0.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM N.D. N.D. N.D. N.D. +0.6
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. N.D. N.D. +0.7
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