Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_00964 and H281DRAFT_00965 are separated by 382 nucleotidesH281DRAFT_00965 and H281DRAFT_00966 are separated by 27 nucleotidesH281DRAFT_00966 and H281DRAFT_00967 are separated by 766 nucleotidesH281DRAFT_00967 and H281DRAFT_00968 are separated by 202 nucleotides H281DRAFT_00964: H281DRAFT_00964 - glc operon protein GlcG, at 1,078,642 to 1,079,046 _00964 H281DRAFT_00965: H281DRAFT_00965 - hypothetical protein, at 1,079,429 to 1,080,313 _00965 H281DRAFT_00966: H281DRAFT_00966 - uroporphyrinogen-III C-methyltransferase (EC 2.1.1.107), at 1,080,341 to 1,081,120 _00966 H281DRAFT_00967: H281DRAFT_00967 - assimilatory nitrite reductase (NAD(P)H) large subunit precursor (EC 1.7.1.4), at 1,081,887 to 1,084,427 _00967 H281DRAFT_00968: H281DRAFT_00968 - MFS transporter, NNP family, nitrate/nitrite transporter, at 1,084,630 to 1,085,997 _00968
Group Condition H281DRAFT_00964 H281DRAFT_00965 H281DRAFT_00966 H281DRAFT_00967 H281DRAFT_00968
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.0 N.D. -1.5 -1.7 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.4 N.D. -1.4 -1.9 N.D.
carbon source 2'-Deoxyinosine 10 mM (C) -0.4 N.D. -0.7 -0.2 N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.1 N.D. -0.4 -0.8 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.7 N.D. -0.5 -0.0 N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.0 N.D. -0.5 -0.7 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.7 N.D. -0.1 -0.4 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.0 N.D. -0.4 -0.7 N.D.
carbon source D-Glucose (C) -0.5 N.D. -0.6 +0.0 N.D.
carbon source adipate (C) +0.5 N.D. -1.4 -0.0 N.D.
carbon source Sebacic (C) -0.4 N.D. -0.6 +0.1 N.D.
carbon source D-Glucose (C) -0.4 N.D. -0.3 +0.2 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 N.D. -0.8 -0.1 N.D.
phage Bu1_100 -1.1 N.D. +0.7 -0.2 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM +0.3 N.D. -0.3 -0.4 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.2 N.D. -1.1 +0.6 N.D.
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.3 N.D. -0.7 +0.1 N.D.
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 N.D. -0.6 -0.0 N.D.
carbon source 2-Deoxy-D-Ribose (C) -0.5 N.D. +0.5 -0.1 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.5 N.D. -0.9 +0.2 N.D.
carbon source D-Galactose (C) -0.6 N.D. +0.6 -0.0 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.4 N.D. +0.5 +0.2 N.D.
carbon source Gallic Acid (C) -0.3 N.D. +0.6 +0.1 N.D.
carbon source Gallic Acid (C) +0.5 N.D. -0.3 +0.2 N.D.
carbon source Malonic (C) -0.1 N.D. +0.6 +0.3 N.D.
carbon source 3-Hydroxypropionate (C) +0.2 N.D. +0.7 +0.2 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 N.D. +0.3 +0.3 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +1.1 N.D. +0.2 +0.1 N.D.
carbon source 3-Hydroxypropionate (C) +0.4 N.D. +0.5 +0.5 N.D.
phage Bu1_10 +0.5 N.D. +0.8 +0.5 N.D.
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