Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_00931 and H281DRAFT_00932 are separated by 46 nucleotidesH281DRAFT_00932 and H281DRAFT_00933 are separated by 176 nucleotidesH281DRAFT_00933 and H281DRAFT_00934 are separated by 262 nucleotidesH281DRAFT_00934 and H281DRAFT_00935 are separated by 212 nucleotides H281DRAFT_00931: H281DRAFT_00931 - TatD DNase family protein, at 1,034,536 to 1,035,330 _00931 H281DRAFT_00932: H281DRAFT_00932 - hypothetical protein, at 1,035,377 to 1,036,117 _00932 H281DRAFT_00933: H281DRAFT_00933 - hypothetical protein, at 1,036,294 to 1,036,650 _00933 H281DRAFT_00934: H281DRAFT_00934 - Small-conductance mechanosensitive channel, at 1,036,913 to 1,038,148 _00934 H281DRAFT_00935: H281DRAFT_00935 - trehalose 6-phosphate synthase, at 1,038,361 to 1,039,773 _00935
Group Condition H281DRAFT_00931 H281DRAFT_00932 H281DRAFT_00933 H281DRAFT_00934 H281DRAFT_00935
phage Bu1_10 +0.3 N.D. -4.0 -0.0 +0.6
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.5 N.D. -1.4 -0.3 -0.1
carbon source D-Glucose (C) -0.5 N.D. -1.3 -0.2 -0.2
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.6 N.D. -1.2 -0.1 -0.2
carbon source 2'-Deoxyinosine 5 mM (C) -0.1 N.D. -1.8 -0.0 -0.1
phage Bu1_100 +0.1 N.D. -3.0 -0.0 +0.9
carbon source 4-Hydroxybenzoic Acid (C) -0.0 N.D. -1.5 +0.3 -0.6
phage Bu1_100 -0.4 N.D. -2.2 -0.3 +1.0
carbon source 2'-Deoxyinosine 5 mM (C) -0.2 N.D. -1.7 +0.2 -0.0
carbon source 2'-Deoxyinosine 10 mM (C) -0.3 N.D. -1.6 -0.0 +0.1
carbon source D-Glucose 20 mM (C) -0.4 N.D. -1.0 -0.0 -0.3
carbon source D-Glucose (C) -0.1 N.D. -1.4 -0.1 +0.0
carbon source 2-Deoxy-D-Ribose 10 mM (C) -0.3 N.D. -1.3 +0.0 -0.1
carbon source 2'-Deoxyinosine 10 mM (C) -0.4 N.D. -1.5 +0.2 +0.2
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.4 N.D. -1.2 +0.2 -0.1
carbon source D-Glucose 20 mM (C) -0.3 N.D. -1.1 +0.2 -0.2
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.4 N.D. -1.0 +0.1 -0.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.2 N.D. -0.8 +0.1 -0.4
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.8 N.D. -0.5 +0.1 -0.1
carbon source Phenylacetic (C) -0.3 N.D. -1.1 +0.4 -0.1
carbon source Sebacic (C) -0.5 N.D. +0.2 -0.5 -0.2
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.2 N.D. -0.9 +0.2 -0.1
carbon source Malonic (C) +0.0 N.D. -1.0 +0.2 -0.1
carbon source Hexanoic (C) -0.1 N.D. -0.5 +0.3 -0.5
carbon source 2-Deoxy-D-Ribose (C) -0.1 N.D. -1.0 +0.1 +0.2
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.4 N.D. -0.7 +0.2 +0.1
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.4 N.D. -1.1 +0.3 +0.6
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.2 N.D. -0.7 +0.4 +0.3
carbon source adipate (C) -0.0 N.D. +0.7 +0.4 +0.6
ecofab LB in EcoFAB_3.5mL +0.0 N.D. +1.7 +0.0 +0.0
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