Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_00925 and H281DRAFT_00926 are separated by 121 nucleotidesH281DRAFT_00926 and H281DRAFT_00927 are separated by 77 nucleotidesH281DRAFT_00927 and H281DRAFT_00928 overlap by 1 nucleotidesH281DRAFT_00928 and H281DRAFT_00929 are separated by 95 nucleotides H281DRAFT_00925: H281DRAFT_00925 - Uncharacterized conserved protein, contains NRDE domain, at 1,028,870 to 1,029,751 _00925 H281DRAFT_00926: H281DRAFT_00926 - hypothetical protein, at 1,029,873 to 1,031,009 _00926 H281DRAFT_00927: H281DRAFT_00927 - UPF0755 protein, at 1,031,087 to 1,032,097 _00927 H281DRAFT_00928: H281DRAFT_00928 - thymidylate kinase, at 1,032,097 to 1,032,717 _00928 H281DRAFT_00929: H281DRAFT_00929 - DNA polymerase III, delta prime subunit, at 1,032,813 to 1,033,847 _00929
Group Condition H281DRAFT_00925 H281DRAFT_00926 H281DRAFT_00927 H281DRAFT_00928 H281DRAFT_00929
phage Bu1_10 +0.6 N.D. -1.6 N.D. N.D.
carbon source adipate (C) -0.1 N.D. -0.8 N.D. N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.1 N.D. -0.7 N.D. N.D.
carbon source succinate (C) +0.2 N.D. -0.9 N.D. N.D.
phage Bu1_100 +0.6 N.D. -1.1 N.D. N.D.
carbon source butyrate (C) +0.2 N.D. -0.6 N.D. N.D.
carbon source Pimelic (C) +0.3 N.D. -0.5 N.D. N.D.
carbon source Dodecandioic (C) +0.3 N.D. -0.4 N.D. N.D.
carbon source Hexanoic (C) +0.4 N.D. -0.5 N.D. N.D.
carbon source Protocatechuic Acid (C) +0.4 N.D. -0.4 N.D. N.D.
phage Bu1_100 +0.6 N.D. -0.5 N.D. N.D.
carbon source acetate (C) +0.5 N.D. -0.3 N.D. N.D.
carbon source propionate (C) +0.6 N.D. -0.3 N.D. N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.2 N.D. +0.9 N.D. N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.0 N.D. +0.8 N.D. N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.0 N.D. +0.8 N.D. N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.0 N.D. +0.8 N.D. N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.0 N.D. +0.9 N.D. N.D.
carbon source D-Glucose 20 mM (C) +0.2 N.D. +0.7 N.D. N.D.
carbon source 2'-Deoxyinosine 5 mM (C) +0.0 N.D. +0.9 N.D. N.D.
carbon source Azelaic (C) -0.3 N.D. +1.3 N.D. N.D.
carbon source 2'-Deoxyinosine 5 mM (C) +0.2 N.D. +0.9 N.D. N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.1 N.D. +1.0 N.D. N.D.
carbon source 2'-Deoxyinosine 10 mM (C) -0.0 N.D. +1.1 N.D. N.D.
carbon source 2'-Deoxyinosine 10 mM (C) +0.2 N.D. +1.0 N.D. N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.2 N.D. +1.1 N.D. N.D.
carbon source Sebacic (C) +0.1 N.D. +1.5 N.D. N.D.
carbon source Phenylacetic (C) -0.2 N.D. +2.0 N.D. N.D.
carbon source Phenylacetic (C) +0.0 N.D. +1.8 N.D. N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.3 N.D. +3.4 N.D. N.D.
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