Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_00877 and H281DRAFT_00878 are separated by 98 nucleotidesH281DRAFT_00878 and H281DRAFT_00879 are separated by 70 nucleotidesH281DRAFT_00879 and H281DRAFT_00880 are separated by 118 nucleotidesH281DRAFT_00880 and H281DRAFT_00881 are separated by 183 nucleotides H281DRAFT_00877: H281DRAFT_00877 - large conductance mechanosensitive channel, at 971,209 to 971,655 _00877 H281DRAFT_00878: H281DRAFT_00878 - threonine dehydratase, at 971,754 to 972,788 _00878 H281DRAFT_00879: H281DRAFT_00879 - acetylornithine deacetylase, at 972,859 to 974,109 _00879 H281DRAFT_00880: H281DRAFT_00880 - transcription-repair coupling factor, at 974,228 to 977,710 _00880 H281DRAFT_00881: H281DRAFT_00881 - 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase, at 977,894 to 978,544 _00881
Group Condition H281DRAFT_00877 H281DRAFT_00878 H281DRAFT_00879 H281DRAFT_00880 H281DRAFT_00881
carbon source Hexanoic (C) -1.1 -0.9 +0.0 -0.3 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 -0.8 -0.5 -0.1 N.D.
carbon source Malonic (C) -1.1 -0.2 +0.1 -0.2 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.3 -0.7 -0.2 -0.1 N.D.
carbon source Phenylacetic (C) -0.4 -0.1 +0.2 -1.0 N.D.
carbon source Sebacic (C) -1.2 -0.1 -0.0 +0.1 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM -0.6 -0.4 +0.1 -0.3 N.D.
carbon source D-Glucose 20 mM (C) -0.7 -0.3 -0.1 -0.0 N.D.
carbon source Hexanoic (C) -1.5 +0.2 +0.3 +0.0 N.D.
carbon source 2-Deoxy-D-Ribose 20 mM (C) -1.0 +0.2 -0.0 -0.2 N.D.
carbon source Protocatechuic Acid (C) +0.0 -0.7 +0.1 -0.4 N.D.
phage Bu1_100 -0.9 +0.2 -0.1 -0.1 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.4 -0.5 -0.0 -0.7 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.6 +0.2 +0.1 -0.5 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 -0.4 -0.5 -0.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 -0.5 -0.5 -0.3 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.9 +0.2 +0.2 -0.1 N.D.
carbon source succinate (C) +0.4 -0.5 +0.1 -0.3 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 -0.3 -0.5 +0.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 -0.1 -0.5 -0.3 N.D.
carbon source butyrate (C) +0.4 -0.5 -0.4 +0.3 N.D.
carbon source 4-Hydroxybenzoic Acid (C) -0.0 -0.7 +0.5 -0.0 N.D.
carbon source Hydroxy-L-Proline (C) -0.6 +0.5 -0.1 +0.0 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM +0.7 -0.6 -0.1 -0.0 N.D.
carbon source butyrate (C) +0.5 -0.7 +0.2 +0.3 N.D.
ecofab LB in EcoFAB_3.5mL +0.3 +0.5 +0.1 -0.5 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 +0.5 -0.3 +0.0 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.7 -0.0 +0.4 -0.4 N.D.
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +1.5 -0.2 +0.0 -0.3 N.D.
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +1.1 +0.1 +0.0 +0.1 N.D.
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