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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia bryophila 376MFSha3.1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
H281DRAFT_00873 and H281DRAFT_00874 are separated by 334 nucleotides
H281DRAFT_00874 and H281DRAFT_00875 are separated by 99 nucleotides
H281DRAFT_00875 and H281DRAFT_00876 are separated by 50 nucleotides
H281DRAFT_00876 and H281DRAFT_00877 are separated by 142 nucleotides
H281DRAFT_00873: H281DRAFT_00873 - hypothetical protein, at 966,003 to 966,494
_00873
H281DRAFT_00874: H281DRAFT_00874 - Bacteriophytochrome (light-regulated signal transduction histidine kinase), at 966,829 to 968,439
_00874
H281DRAFT_00875: H281DRAFT_00875 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 968,539 to 969,042
_00875
H281DRAFT_00876: H281DRAFT_00876 - PAS/PAC sensor hybrid histidine kinase (EC 2.7.13.3), at 969,093 to 971,066
_00876
H281DRAFT_00877: H281DRAFT_00877 - large conductance mechanosensitive channel, at 971,209 to 971,655
_00877
Group
Condition
H281DRAFT
_00873
H281DRAFT
_00874
H281DRAFT
_00875
H281DRAFT
_00876
H281DRAFT
_00877
carbon source
Hexanoic (C)
-0.4
+0.2
-0.2
+0.4
-1.5
carbon source
Malonic (C)
-0.4
-0.1
+0.1
+0.0
-1.1
carbon source
Hexanoic (C)
-0.6
-0.0
+0.1
+0.2
-1.1
carbon source
Valeric (C)
-0.5
+0.1
-0.4
+0.2
-0.3
phage
Bu1_10
-1.2
+0.3
+0.4
-0.4
-0.1
carbon source
Sebacic (C)
+0.4
-0.1
+0.0
+0.1
-1.2
carbon source
2-Deoxy-D-Ribose 20 mM (C)
-0.0
+0.0
+0.4
+0.0
-1.0
carbon source
2-Deoxy-D-Ribose 10 mM (C)
+0.2
-0.3
+0.3
-0.0
-0.7
in planta
Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
-0.4
-0.2
+0.5
-0.0
-0.3
carbon source
Hydroxy-L-Proline (C)
-0.3
-0.1
+0.6
+0.2
-0.6
phage
Bu1_100
+0.0
+0.2
+0.4
+0.3
-0.9
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
-0.3
-0.1
-0.3
+0.2
+0.4
carbon source
2'-Deoxyinosine 10 mM (C)
-0.1
-0.4
+0.8
-0.1
-0.1
carbon source
D-Glucose 20 mM (C)
+0.2
-0.1
+0.7
-0.0
-0.7
carbon source
2-Deoxy-D-ribonic lithium salt 10 mM (C)
+0.4
+0.0
+0.6
-0.0
-0.9
carbon source
2-Deoxy-D-Ribose 20 mM (C)
+0.5
-0.1
+0.6
+0.1
-0.7
carbon source
2'-Deoxyinosine 5 mM (C)
+0.1
-0.3
+0.7
+0.0
-0.2
carbon source
D-Glucose (C)
+0.8
-0.0
+0.2
-0.1
-0.4
supernatant
Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x
-0.3
-0.0
-0.7
+0.1
+1.5
carbon source
3-Hydroxypropionate (C)
+0.4
-0.3
+0.6
+0.0
+0.1
carbon source
2-Deoxyadenosine 5-monophosphate 2.5 mM (C)
+0.2
-0.1
+0.9
+0.0
-0.1
carbon source
2-Deoxyadenosine 5-monophosphate 5 mM (C)
+0.7
+0.1
+0.7
+0.0
-0.6
carbon source
Deoxyribonucleic from herring sperm 10 mg/mL (C)
+0.2
+0.4
+0.2
+0.3
-0.2
carbon source
2'-Deoxyinosine 10 mM (C)
+0.3
-0.2
+0.9
+0.1
-0.1
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
+0.6
+0.2
-0.2
+0.1
+0.4
carbon source
3-Hydroxypropionate (C)
+0.4
-0.2
+0.7
-0.0
+0.4
carbon source
Azelaic (C)
+0.5
+0.3
+0.3
+0.3
-0.1
carbon source
butyrate (C)
+0.4
+0.0
+0.4
+0.2
+0.4
carbon source
Deoxyribonucleic from herring sperm 10 mg/mL (C)
-0.0
+0.3
+0.6
-0.1
+0.7
supernatant
LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x
+0.3
-0.1
+0.1
+0.2
+1.1
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