Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_00873 and H281DRAFT_00874 are separated by 334 nucleotidesH281DRAFT_00874 and H281DRAFT_00875 are separated by 99 nucleotidesH281DRAFT_00875 and H281DRAFT_00876 are separated by 50 nucleotidesH281DRAFT_00876 and H281DRAFT_00877 are separated by 142 nucleotides H281DRAFT_00873: H281DRAFT_00873 - hypothetical protein, at 966,003 to 966,494 _00873 H281DRAFT_00874: H281DRAFT_00874 - Bacteriophytochrome (light-regulated signal transduction histidine kinase), at 966,829 to 968,439 _00874 H281DRAFT_00875: H281DRAFT_00875 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 968,539 to 969,042 _00875 H281DRAFT_00876: H281DRAFT_00876 - PAS/PAC sensor hybrid histidine kinase (EC 2.7.13.3), at 969,093 to 971,066 _00876 H281DRAFT_00877: H281DRAFT_00877 - large conductance mechanosensitive channel, at 971,209 to 971,655 _00877
Group Condition H281DRAFT_00873 H281DRAFT_00874 H281DRAFT_00875 H281DRAFT_00876 H281DRAFT_00877
carbon source Hexanoic (C) -0.4 +0.2 -0.2 +0.4 -1.5
carbon source Malonic (C) -0.4 -0.1 +0.1 +0.0 -1.1
carbon source Hexanoic (C) -0.6 -0.0 +0.1 +0.2 -1.1
carbon source Valeric (C) -0.5 +0.1 -0.4 +0.2 -0.3
phage Bu1_10 -1.2 +0.3 +0.4 -0.4 -0.1
carbon source Sebacic (C) +0.4 -0.1 +0.0 +0.1 -1.2
carbon source 2-Deoxy-D-Ribose 20 mM (C) -0.0 +0.0 +0.4 +0.0 -1.0
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.2 -0.3 +0.3 -0.0 -0.7
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.4 -0.2 +0.5 -0.0 -0.3
carbon source Hydroxy-L-Proline (C) -0.3 -0.1 +0.6 +0.2 -0.6
phage Bu1_100 +0.0 +0.2 +0.4 +0.3 -0.9
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.3 -0.1 -0.3 +0.2 +0.4
carbon source 2'-Deoxyinosine 10 mM (C) -0.1 -0.4 +0.8 -0.1 -0.1
carbon source D-Glucose 20 mM (C) +0.2 -0.1 +0.7 -0.0 -0.7
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.4 +0.0 +0.6 -0.0 -0.9
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.5 -0.1 +0.6 +0.1 -0.7
carbon source 2'-Deoxyinosine 5 mM (C) +0.1 -0.3 +0.7 +0.0 -0.2
carbon source D-Glucose (C) +0.8 -0.0 +0.2 -0.1 -0.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.3 -0.0 -0.7 +0.1 +1.5
carbon source 3-Hydroxypropionate (C) +0.4 -0.3 +0.6 +0.0 +0.1
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.2 -0.1 +0.9 +0.0 -0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.7 +0.1 +0.7 +0.0 -0.6
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.2 +0.4 +0.2 +0.3 -0.2
carbon source 2'-Deoxyinosine 10 mM (C) +0.3 -0.2 +0.9 +0.1 -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +0.2 -0.2 +0.1 +0.4
carbon source 3-Hydroxypropionate (C) +0.4 -0.2 +0.7 -0.0 +0.4
carbon source Azelaic (C) +0.5 +0.3 +0.3 +0.3 -0.1
carbon source butyrate (C) +0.4 +0.0 +0.4 +0.2 +0.4
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.0 +0.3 +0.6 -0.1 +0.7
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.3 -0.1 +0.1 +0.2 +1.1
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