Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_00791 and H281DRAFT_00792 are separated by 27 nucleotidesH281DRAFT_00792 and H281DRAFT_00793 are separated by 162 nucleotidesH281DRAFT_00793 and H281DRAFT_00794 are separated by 148 nucleotidesH281DRAFT_00794 and H281DRAFT_00795 overlap by 1 nucleotides H281DRAFT_00791: H281DRAFT_00791 - SSU ribosomal protein S18P, at 877,711 to 877,986 _00791 H281DRAFT_00792: H281DRAFT_00792 - LSU ribosomal protein L9P, at 878,014 to 878,466 _00792 H281DRAFT_00793: H281DRAFT_00793 - primary replicative DNA helicase, at 878,629 to 880,014 _00793 H281DRAFT_00794: H281DRAFT_00794 - hypothetical protein, at 880,163 to 880,789 _00794 H281DRAFT_00795: H281DRAFT_00795 - inorganic phosphate transporter, PiT family, at 880,789 to 881,799 _00795
Group Condition H281DRAFT_00791 H281DRAFT_00792 H281DRAFT_00793 H281DRAFT_00794 H281DRAFT_00795
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. N.D. -3.1 -0.8
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. N.D. N.D. -2.1 -1.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. N.D. -1.2 -1.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. N.D. -1.2 -1.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. N.D. -1.3 -0.9
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. N.D. -1.0 -1.2
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. N.D. N.D. -1.0 -1.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. N.D. -1.3 -0.7
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x N.D. N.D. N.D. -1.4 -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. N.D. -0.8 -1.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. N.D. N.D. -0.7 -1.2
carbon source D-Galactose (C) N.D. N.D. N.D. -1.1 -0.8
carbon source 2-furoic (C) N.D. N.D. N.D. -1.2 -0.7
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. N.D. N.D. -1.3 -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. N.D. -0.6 -1.2
carbon source Phenylacetic (C) N.D. N.D. N.D. -0.7 -1.0
carbon source D-Glucose 20 mM (C) N.D. N.D. N.D. -1.0 -0.8
carbon source 4-Hydroxybenzoic Acid (C) N.D. N.D. N.D. -0.9 -0.7
carbon source Phenylacetic (C) N.D. N.D. N.D. -0.4 -1.1
carbon source D-Glucose (C) N.D. N.D. N.D. -0.8 -0.7
carbon source p-Coumaric (C) N.D. N.D. N.D. -0.9 -0.5
carbon source Protocatechuic Acid (C) N.D. N.D. N.D. -0.8 -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. N.D. -0.8 -0.6
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. N.D. -0.5 -0.8
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x N.D. N.D. N.D. -0.7 -0.5
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) N.D. N.D. N.D. -0.7 -0.6
carbon source D-Glucose (C) N.D. N.D. N.D. -0.8 -0.4
carbon source 2-Deoxy-D-Ribose 20 mM (C) N.D. N.D. N.D. -0.9 -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. N.D. -0.4 -0.8
phage Bu1_10 N.D. N.D. N.D. +0.9 +0.4
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