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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia bryophila 376MFSha3.1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
H281DRAFT_00778 and H281DRAFT_00779 are separated by 150 nucleotides
H281DRAFT_00779 and H281DRAFT_00780 overlap by 4 nucleotides
H281DRAFT_00780 and H281DRAFT_00781 overlap by 1 nucleotides
H281DRAFT_00781 and H281DRAFT_00782 are separated by 79 nucleotides
H281DRAFT_00778: H281DRAFT_00778 - sulfate transport system substrate-binding protein, at 864,358 to 865,407
_00778
H281DRAFT_00779: H281DRAFT_00779 - sulfate transport system permease protein, at 865,558 to 866,454
_00779
H281DRAFT_00780: H281DRAFT_00780 - sulfate transport system permease protein, at 866,451 to 867,485
_00780
H281DRAFT_00781: H281DRAFT_00781 - sulfate transport system ATP-binding protein, at 867,485 to 868,543
_00781
H281DRAFT_00782: H281DRAFT_00782 - transcriptional regulator, LysR family, at 868,623 to 869,549
_00782
Group
Condition
H281DRAFT
_00778
H281DRAFT
_00779
H281DRAFT
_00780
H281DRAFT
_00781
H281DRAFT
_00782
supernatant
RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x
-0.3
-1.6
-0.1
-0.1
+0.0
carbon source
Gallic Acid (C)
-0.0
-1.1
-0.2
-0.3
-0.3
carbon source
4-Hydroxybenzoic Acid (C)
-0.4
-0.7
+0.1
-0.3
-0.4
carbon source
Protocatechuic Acid (C)
-0.1
-0.3
-0.2
-0.7
-0.3
phage
Bu1_100
-0.4
-0.9
+0.2
-0.8
+0.5
carbon source
succinate (C)
-0.1
-1.1
-0.2
-0.3
+0.3
carbon source
Gallic Acid (C)
-0.1
-0.6
+0.1
-0.6
+0.1
carbon source
Protocatechuic Acid (C)
-0.1
-0.4
-0.1
-0.6
+0.3
carbon source
2-Deoxy-D-Ribose (C)
-0.1
-0.7
+0.0
-0.4
+0.4
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
-0.1
-0.6
+0.0
-0.4
+0.5
carbon source
butyrate (C)
+0.2
-1.2
+0.5
-0.1
+0.2
carbon source
2-Deoxy-D-ribonic lithium salt 10 mM (C)
+0.2
-0.7
+0.1
-0.3
+0.4
carbon source
D-Glucose (C)
-0.2
-0.5
+0.4
-0.1
+0.3
carbon source
2-Deoxy-D-Ribose 20 mM (C)
-0.0
-1.0
+0.4
-0.1
+0.7
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
-0.2
-0.6
+0.4
+0.2
+0.2
carbon source
succinate (C)
-0.6
+0.6
-0.0
-0.1
+0.3
carbon source
D-Glucose 20 mM (C)
+0.3
-0.2
-0.2
-0.4
+0.6
carbon source
2-Deoxy-D-Ribose 10 mM (C)
+0.4
-1.0
+0.3
-0.1
+1.0
carbon source
Valeric (C)
-0.6
+0.2
+0.3
-0.1
+0.7
carbon source
propionate (C)
-0.3
+0.6
+0.2
-0.3
+0.6
carbon source
Deoxyribonucleic from herring sperm 10 mg/mL (C)
+0.2
+0.1
+0.0
-0.3
+0.9
carbon source
Suberic (C)
-0.3
+0.2
+0.1
-0.0
+0.9
carbon source
Valeric (C)
-0.3
+0.0
+0.2
+0.4
+0.7
carbon source
Sebacic (C)
-0.2
+1.2
-0.1
-0.1
+0.2
carbon source
2-Deoxy-D-Ribose 20 mM (C)
+0.3
-0.1
+0.4
-0.2
+0.7
carbon source
2'-Deoxyinosine 5 mM (C)
+0.1
+0.6
+0.3
-0.1
+0.5
carbon source
2-Deoxyadenosine 5-monophosphate 5 mM (C)
+0.0
+0.1
+0.4
-0.1
+1.1
carbon source
2-Deoxy-D-ribonic lithium salt 10 mM (C)
+0.3
+0.3
+0.3
+0.1
+0.5
carbon source
adipate (C)
+0.5
+2.0
+1.0
+0.1
+2.3
carbon source
adipate (C)
+0.7
+1.9
+1.2
+0.4
+2.5
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