Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_00778 and H281DRAFT_00779 are separated by 150 nucleotidesH281DRAFT_00779 and H281DRAFT_00780 overlap by 4 nucleotidesH281DRAFT_00780 and H281DRAFT_00781 overlap by 1 nucleotidesH281DRAFT_00781 and H281DRAFT_00782 are separated by 79 nucleotides H281DRAFT_00778: H281DRAFT_00778 - sulfate transport system substrate-binding protein, at 864,358 to 865,407 _00778 H281DRAFT_00779: H281DRAFT_00779 - sulfate transport system permease protein, at 865,558 to 866,454 _00779 H281DRAFT_00780: H281DRAFT_00780 - sulfate transport system permease protein, at 866,451 to 867,485 _00780 H281DRAFT_00781: H281DRAFT_00781 - sulfate transport system ATP-binding protein, at 867,485 to 868,543 _00781 H281DRAFT_00782: H281DRAFT_00782 - transcriptional regulator, LysR family, at 868,623 to 869,549 _00782
Group Condition H281DRAFT_00778 H281DRAFT_00779 H281DRAFT_00780 H281DRAFT_00781 H281DRAFT_00782
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x -0.3 -1.6 -0.1 -0.1 +0.0
carbon source Gallic Acid (C) -0.0 -1.1 -0.2 -0.3 -0.3
carbon source 4-Hydroxybenzoic Acid (C) -0.4 -0.7 +0.1 -0.3 -0.4
carbon source Protocatechuic Acid (C) -0.1 -0.3 -0.2 -0.7 -0.3
phage Bu1_100 -0.4 -0.9 +0.2 -0.8 +0.5
carbon source succinate (C) -0.1 -1.1 -0.2 -0.3 +0.3
carbon source Gallic Acid (C) -0.1 -0.6 +0.1 -0.6 +0.1
carbon source Protocatechuic Acid (C) -0.1 -0.4 -0.1 -0.6 +0.3
carbon source 2-Deoxy-D-Ribose (C) -0.1 -0.7 +0.0 -0.4 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 -0.6 +0.0 -0.4 +0.5
carbon source butyrate (C) +0.2 -1.2 +0.5 -0.1 +0.2
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.2 -0.7 +0.1 -0.3 +0.4
carbon source D-Glucose (C) -0.2 -0.5 +0.4 -0.1 +0.3
carbon source 2-Deoxy-D-Ribose 20 mM (C) -0.0 -1.0 +0.4 -0.1 +0.7
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 -0.6 +0.4 +0.2 +0.2
carbon source succinate (C) -0.6 +0.6 -0.0 -0.1 +0.3
carbon source D-Glucose 20 mM (C) +0.3 -0.2 -0.2 -0.4 +0.6
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.4 -1.0 +0.3 -0.1 +1.0
carbon source Valeric (C) -0.6 +0.2 +0.3 -0.1 +0.7
carbon source propionate (C) -0.3 +0.6 +0.2 -0.3 +0.6
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.2 +0.1 +0.0 -0.3 +0.9
carbon source Suberic (C) -0.3 +0.2 +0.1 -0.0 +0.9
carbon source Valeric (C) -0.3 +0.0 +0.2 +0.4 +0.7
carbon source Sebacic (C) -0.2 +1.2 -0.1 -0.1 +0.2
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.3 -0.1 +0.4 -0.2 +0.7
carbon source 2'-Deoxyinosine 5 mM (C) +0.1 +0.6 +0.3 -0.1 +0.5
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.0 +0.1 +0.4 -0.1 +1.1
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) +0.3 +0.3 +0.3 +0.1 +0.5
carbon source adipate (C) +0.5 +2.0 +1.0 +0.1 +2.3
carbon source adipate (C) +0.7 +1.9 +1.2 +0.4 +2.5
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