Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	H281DRAFT_00753	H281DRAFT_00754	H281DRAFT_00755	H281DRAFT_00756	H281DRAFT_00757
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-0.1	+0.1	-2.0	+0.2	-1.8
carbon source	butyrate (C)	-0.7	-0.2	-1.2	+0.1	-1.5
carbon source	Hexanoic (C)	+0.0	-0.2	-0.9	+0.1	-2.2
carbon source	2-Deoxy-D-Ribose (C)	-0.5	+0.0	-2.2	-0.1	-0.2
carbon source	3-Hydroxypropionate (C)	-0.2	+0.2	-0.8	-1.2	-0.8
	Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	-0.3	-0.1	-1.7	+0.2	-0.9
carbon source	2-Deoxy-D-Ribose (C)	+0.3	-0.0	-1.6	+0.0	-1.3
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.67x; and D-Glucose 37 mM	-0.7	+0.1	-0.1	-0.0	-1.7
carbon source	2-Deoxy-D-ribonic lithium salt (C)	-0.2	+0.0	-1.4	-0.0	-1.0
phage	Bu1_100	+0.5	+0.1	-0.5	-0.4	-2.1
carbon source	2-Deoxy-D-Ribose (C)	-0.5	+0.2	-1.1	-0.2	-0.6
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM	-0.5	+0.2	-0.2	+0.1	-1.8
carbon source	2-Deoxy-D-ribonic lithium salt (C)	-0.2	+0.1	-1.3	-0.0	-0.8
supernatant	Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x	-0.4	-0.2	+0.2	+0.0	-1.7
in planta	Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days	-0.5	+0.1	-1.2	+0.1	-0.5
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.3	+0.0	-1.4	-0.2	-0.8
carbon source	Hydroxy-L-Proline (C)	+0.5	+0.1	-2.0	-0.0	-0.3
carbon source	2'-Deoxyinosine 5 mM (C)	-0.9	+0.2	-1.6	+0.0	+0.7
carbon source	Valeric (C)	+0.7	-0.3	-1.3	-0.2	-0.4
carbon source	2'-Deoxyinosine 10 mM (C)	-0.7	-0.0	-1.4	-0.2	+1.0
carbon source	4-Hydroxybenzoic Acid (C)	+0.2	+0.3	-1.8	+0.1	+0.1
carbon source	butyrate (C)	+1.0	-0.0	-0.8	+0.1	-0.8
carbon source	2-Deoxy-D-Ribose 10 mM (C)	-0.4	+0.1	-1.4	-0.0	+1.2
in planta	Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days	+0.9	+0.3	-0.5	-0.0	-1.2
carbon source	3-Hydroxypropionate (C)	+0.5	-0.0	-0.7	-0.7	+0.5
carbon source	Hexanoic (C)	-0.5	-0.2	-0.8	+0.5	+1.0
carbon source	propionate (C)	+1.1	-0.0	-0.9	-0.4	+0.5
carbon source	2-Deoxyadenosine 5-monophosphate 2.5 mM (C)	-0.7	+0.3	-0.3	+0.0	+1.1
carbon source	Pimelic (C)	+0.7	-0.1	-0.6	+0.1	+1.4
carbon source	Malonic (C)	+0.5	+0.0	+0.2	-0.0	+1.6