Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_00708 and H281DRAFT_00709 are separated by 205 nucleotidesH281DRAFT_00709 and H281DRAFT_00710 are separated by 166 nucleotidesH281DRAFT_00710 and H281DRAFT_00711 are separated by 212 nucleotidesH281DRAFT_00711 and H281DRAFT_00712 are separated by 305 nucleotides H281DRAFT_00708: H281DRAFT_00708 - Fe-S-cluster-containing dehydrogenase component, at 796,531 to 797,394 _00708 H281DRAFT_00709: H281DRAFT_00709 - transcriptional regulator, TetR family, at 797,600 to 798,259 _00709 H281DRAFT_00710: H281DRAFT_00710 - tRNA_Leu_CAG, at 798,426 to 798,512 _00710 H281DRAFT_00711: H281DRAFT_00711 - tRNA_Leu_CAG, at 798,725 to 798,811 _00711 H281DRAFT_00712: H281DRAFT_00712 - RNAse R, at 799,117 to 801,618 _00712
Group Condition H281DRAFT_00708 H281DRAFT_00709 H281DRAFT_00710 H281DRAFT_00711 H281DRAFT_00712
carbon source 4-Hydroxybenzoic Acid (C) +0.6 -0.1 -0.9 N.D. -2.4
carbon source propionate (C) +0.0 -0.2 -2.3 N.D. -0.3
carbon source Phenylacetic (C) +0.0 +0.2 -0.7 N.D. -2.2
phage Bu1_100 -0.2 +0.3 -2.0 N.D. -0.8
carbon source 2-Deoxy-D-Ribose (C) -0.3 +0.1 -1.6 N.D. -0.7
carbon source Phenylacetic (C) +0.5 -0.0 -0.9 N.D. -2.2
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.9 -0.1 -1.1 N.D. -0.2
carbon source Protocatechuic Acid (C) +0.1 -0.2 -1.2 N.D. -0.8
carbon source 2-Deoxy-D-Ribose (C) -0.3 +0.1 -1.2 N.D. -0.4
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.0 -0.0 -1.0 N.D. -0.7
carbon source D,L-Lactate (C) -0.4 +0.0 -0.2 N.D. -1.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.0 -0.4 -0.9 N.D. -0.3
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.2 +0.0 -0.5 N.D. -1.3
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.1 -0.1 -0.1 N.D. -1.3
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.4 -0.2 -1.8 N.D. +0.0
carbon source Protocatechuic Acid (C) +0.0 +0.2 -0.9 N.D. -0.9
carbon source D,L-Lactate (C) -0.2 -0.1 +0.0 N.D. -1.1
carbon source D-Glucose (C) -0.2 -0.3 +0.0 N.D. -1.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.3 +0.1 -0.5 N.D. -0.7
carbon source D-Glucose (C) -0.2 -0.3 +0.2 N.D. -1.0
carbon source p-Coumaric (C) -0.3 +0.3 +0.1 N.D. -1.2
carbon source D-Glucose (C) +0.1 +0.1 -0.9 N.D. -0.4
carbon source p-Coumaric (C) +0.1 +0.2 +0.2 N.D. -1.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.4 -0.1 -0.7 N.D. -0.4
carbon source adipate (C) +0.4 -0.2 -0.7 N.D. -0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.8 +0.2 +0.5 N.D. -0.6
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.5 -0.2 +0.5 N.D. +0.2
phage Bu1_10 +0.2 +0.0 +0.6 N.D. -0.6
carbon source Sebacic (C) +0.3 +0.1 +0.6 N.D. -0.5
carbon source adipate (C) -0.1 +0.4 +1.0 N.D. -0.0
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