Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_00685 and H281DRAFT_00686 are separated by 112 nucleotidesH281DRAFT_00686 and H281DRAFT_00687 are separated by 875 nucleotidesH281DRAFT_00687 and H281DRAFT_00688 are separated by 171 nucleotidesH281DRAFT_00688 and H281DRAFT_00689 are separated by 216 nucleotides H281DRAFT_00685: H281DRAFT_00685 - hypothetical protein, at 765,085 to 767,313 _00685 H281DRAFT_00686: H281DRAFT_00686 - CHAD domain-containing protein, at 767,426 to 768,259 _00686 H281DRAFT_00687: H281DRAFT_00687 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 769,135 to 769,575 _00687 H281DRAFT_00688: H281DRAFT_00688 - Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family, at 769,747 to 771,585 _00688 H281DRAFT_00689: H281DRAFT_00689 - transcriptional regulator, AraC family, at 771,802 to 772,686 _00689
Group Condition H281DRAFT_00685 H281DRAFT_00686 H281DRAFT_00687 H281DRAFT_00688 H281DRAFT_00689
carbon source Sebacic (C) -0.9 +0.0 -1.4 -0.1 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -0.8 -0.3 -0.3 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 -0.4 -0.1 -0.2 N.D.
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 -0.5 -0.4 -0.2 N.D.
carbon source 2'-Deoxyinosine 5 mM (C) +0.2 -0.5 -0.4 -0.2 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.0 -0.4 +0.4 -0.5 N.D.
carbon source succinate (C) -0.4 +0.0 -0.4 +0.5 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.3 -0.3 +0.3 -0.1 N.D.
carbon source Dodecandioic (C) -0.0 -0.0 -0.5 +0.5 N.D.
ecofab LB in EcoFAB_3.5mL -0.3 +0.2 +0.3 -0.2 N.D.
carbon source Valeric (C) -0.0 -0.4 +0.1 +0.5 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.4 -0.6 +0.7 -0.3 N.D.
phage Bu1_10 +0.2 -0.1 -0.5 +0.6 N.D.
carbon source propionate (C) +0.2 -0.3 +0.6 -0.1 N.D.
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 -0.3 +0.3 +0.2 N.D.
carbon source D-Glucose (C) +0.1 -0.2 +0.3 +0.4 N.D.
phage Bu1_100 -0.2 -0.0 +0.8 +0.0 N.D.
carbon source propionate (C) +0.2 +0.1 +0.7 -0.1 N.D.
carbon source Hexanoic (C) -0.1 +0.3 -0.1 +0.7 N.D.
lb LB +0.3 -0.1 +0.6 +0.2 N.D.
supernatant RCH2_defined_glucose with Supernatant; Trichoderma harzianum M10 and Trichoderma harzanium TH1 and Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.1 +0.5 +0.5 -0.1 N.D.
carbon source Malonic (C) +0.2 +0.1 +0.4 +0.3 N.D.
carbon source Protocatechuic Acid (C) +0.0 +0.1 +0.5 +0.4 N.D.
carbon source acetate (C) +0.2 +0.3 +0.6 +0.0 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.1 -0.0 +1.0 +0.0 N.D.
carbon source Malonic (C) +0.2 -0.2 +0.5 +0.5 N.D.
carbon source Azelaic (C) +0.0 +0.4 +0.5 +0.4 N.D.
carbon source D,L-Lactate (C) +0.3 +0.2 +0.9 -0.0 N.D.
carbon source Protocatechuic Acid (C) +0.1 +0.4 +0.6 +0.3 N.D.
phage Bu1_100 +0.3 +0.0 +0.6 +0.5 N.D.
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