Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_00648 and H281DRAFT_00649 are separated by 62 nucleotidesH281DRAFT_00649 and H281DRAFT_00650 are separated by 64 nucleotidesH281DRAFT_00650 and H281DRAFT_00651 are separated by 91 nucleotidesH281DRAFT_00651 and H281DRAFT_00652 are separated by 103 nucleotides H281DRAFT_00648: H281DRAFT_00648 - Uncharacterized conserved protein YgbK, DUF1537 family, at 725,941 to 727,239 _00648 H281DRAFT_00649: H281DRAFT_00649 - 4-hydroxythreonine-4-phosphate dehydrogenase, at 727,302 to 728,303 _00649 H281DRAFT_00650: H281DRAFT_00650 - transcriptional regulator, DeoR family, at 728,368 to 729,204 _00650 H281DRAFT_00651: H281DRAFT_00651 - hypothetical protein, at 729,296 to 729,715 _00651 H281DRAFT_00652: H281DRAFT_00652 - Glycosyltransferase involved in cell wall bisynthesis, at 729,819 to 730,586 _00652
Group Condition H281DRAFT_00648 H281DRAFT_00649 H281DRAFT_00650 H281DRAFT_00651 H281DRAFT_00652
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.1 N.D. -1.8 N.D. -0.3
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.5 N.D. -1.9 N.D. -0.4
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.4 N.D. -1.9 N.D. -0.4
phage Bu1_10 -2.5 N.D. +0.0 N.D. +0.3
carbon source 2'-Deoxyinosine 5 mM (C) -0.1 N.D. -1.7 N.D. -0.4
carbon source 4-Hydroxybenzoic Acid (C) -1.1 N.D. -1.0 N.D. -0.0
carbon source 2'-Deoxyinosine 10 mM (C) -0.9 N.D. -0.9 N.D. -0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 N.D. -2.4 N.D. +0.4
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.4 N.D. -1.3 N.D. -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.1 N.D. -1.6 N.D. +0.0
carbon source propionate (C) -0.4 N.D. -1.2 N.D. -0.0
carbon source Dodecandioic (C) -0.6 N.D. -0.3 N.D. -0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 N.D. -1.5 N.D. -0.2
carbon source succinate (C) +0.1 N.D. -1.2 N.D. -0.3
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.0 N.D. -1.5 N.D. +0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.5 N.D. -1.9 N.D. +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 N.D. -1.3 N.D. -0.2
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.6 N.D. -1.8 N.D. -0.1
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.5 N.D. -1.6 N.D. -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.3 N.D. -1.5 N.D. -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.3 N.D. -1.3 N.D. +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.2 N.D. -1.2 N.D. +0.2
carbon source D-Glucose 20 mM (C) +0.4 N.D. -0.8 N.D. -0.3
carbon source Valeric (C) +0.4 N.D. -1.1 N.D. +0.0
carbon source Hydroxy-L-Proline (C) +0.3 N.D. -1.0 N.D. +0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days +0.6 N.D. -0.8 N.D. -0.3
carbon source succinate (C) +0.7 N.D. -0.6 N.D. -0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM +0.8 N.D. -0.5 N.D. -0.3
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +1.1 N.D. +0.3 N.D. -0.1
carbon source Azelaic (C) +0.7 N.D. +0.9 N.D. -0.1
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