Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_00591 and H281DRAFT_00592 are separated by 128 nucleotidesH281DRAFT_00592 and H281DRAFT_00593 are separated by 142 nucleotidesH281DRAFT_00593 and H281DRAFT_00594 are separated by 135 nucleotidesH281DRAFT_00594 and H281DRAFT_00595 are separated by 24 nucleotides H281DRAFT_00591: H281DRAFT_00591 - Protein of unknown function (DUF2866), at 659,101 to 659,379 _00591 H281DRAFT_00592: H281DRAFT_00592 - Crotonobetainyl-CoA:carnitine CoA-transferase CaiB, at 659,508 to 660,650 _00592 H281DRAFT_00593: H281DRAFT_00593 - ATP-binding cassette, subfamily F, member 3, at 660,793 to 662,742 _00593 H281DRAFT_00594: H281DRAFT_00594 - glutathione peroxidase, at 662,878 to 663,357 _00594 H281DRAFT_00595: H281DRAFT_00595 - cardiolipin synthase, at 663,382 to 664,848 _00595
Group Condition H281DRAFT_00591 H281DRAFT_00592 H281DRAFT_00593 H281DRAFT_00594 H281DRAFT_00595
carbon source 2'-Deoxyinosine 10 mM (C) N.D. -0.5 -0.6 -0.0 -0.3
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x N.D. -0.3 -0.4 -0.3 -0.3
carbon source 2'-Deoxyinosine 5 mM (C) N.D. -0.2 -0.6 -0.2 -0.4
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. -0.1 -0.6 -0.3 -0.2
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. +0.1 -0.1 -0.3 -0.8
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. -0.1 -0.2 -0.4 -0.3
carbon source 2-Deoxy-D-Ribose 20 mM (C) N.D. -0.1 -0.5 +0.1 -0.4
phage Bu1_100 N.D. -0.4 +0.2 -0.9 +0.2
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. -0.0 -0.5 +0.1 -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.1 -0.2 -0.4 -0.2
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. +0.1 -0.7 +0.1 -0.2
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.2 +0.2 -0.0 -0.9
carbon source 4-Hydroxybenzoic Acid (C) N.D. +0.1 -0.4 +0.1 -0.4
phage Bu1_100 N.D. +0.3 -0.2 -0.1 -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.4 +0.2 -0.5 -0.5
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.1 +0.0 +0.2 -0.7
carbon source adipate (C) N.D. +0.0 -0.5 +0.2 +0.3
carbon source Dodecandioic (C) N.D. +0.4 -0.3 +0.4 -0.2
carbon source adipate (C) N.D. +0.0 -0.4 +0.3 +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. +0.5 +0.3 +0.0 -0.4
carbon source succinate (C) N.D. +0.3 -0.2 +0.4 -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days N.D. +0.5 +0.3 -0.1 -0.4
carbon source butyrate (C) N.D. +0.3 -0.4 +0.5 +0.3
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. -0.1 +0.4 +0.3 +0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM N.D. +0.4 -0.2 -0.1 +0.9
carbon source Suberic (C) N.D. +0.3 -0.1 +0.4 +0.4
carbon source 3-hydroxybutyric (C) N.D. +0.2 +0.1 +0.6 +0.1
carbon source Malonic (C) N.D. +0.4 -0.0 +0.1 +0.7
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM N.D. +0.3 +0.2 +0.4 +0.6
carbon source Valeric (C) N.D. +0.7 +0.1 +0.4 +0.5
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