Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_00529 and H281DRAFT_00530 are separated by 154 nucleotidesH281DRAFT_00530 and H281DRAFT_00531 are separated by 519 nucleotidesH281DRAFT_00531 and H281DRAFT_00532 are separated by 177 nucleotidesH281DRAFT_00532 and H281DRAFT_00533 are separated by 64 nucleotides H281DRAFT_00529: H281DRAFT_00529 - KUP system potassium uptake protein, at 591,519 to 593,405 _00529 H281DRAFT_00530: H281DRAFT_00530 - uncharacterized protein, at 593,560 to 595,908 _00530 H281DRAFT_00531: H281DRAFT_00531 - hypothetical protein, at 596,428 to 597,186 _00531 H281DRAFT_00532: H281DRAFT_00532 - hypothetical protein, at 597,364 to 597,582 _00532 H281DRAFT_00533: H281DRAFT_00533 - ATP-dependent DNA helicase DinG, at 597,647 to 599,911 _00533
Group Condition H281DRAFT_00529 H281DRAFT_00530 H281DRAFT_00531 H281DRAFT_00532 H281DRAFT_00533
carbon source butyrate (C) -1.2 -1.1 -3.2 N.D. -0.2
carbon source acetate (C) -1.6 -1.1 -2.7 N.D. -0.1
phage Bu1_10 -1.7 -0.7 -2.5 N.D. -0.3
carbon source Valeric (C) -1.2 -1.0 -2.3 N.D. +0.1
phage Bu1_100 -0.9 -0.4 -3.1 N.D. +0.0
phage Bu1_100 -1.0 -0.3 -2.8 N.D. -0.1
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -1.0 -0.7 -2.3 N.D. +0.0
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -0.6 -1.3 -1.9 N.D. +0.0
carbon source propionate (C) -0.0 -0.7 -2.8 N.D. -0.2
carbon source propionate (C) -0.0 -0.7 -2.7 N.D. -0.1
control NoPhageControl -0.6 -0.3 -2.2 N.D. -0.0
carbon source Phenylacetic (C) -2.9 -0.4 +0.1 N.D. +0.1
carbon source acetate (C) -0.2 -0.4 -2.2 N.D. -0.3
carbon source Valeric (C) -1.5 -0.1 -1.3 N.D. -0.2
carbon source Protocatechuic Acid (C) -0.4 -0.0 -2.5 N.D. -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.7 -1.2 +0.1 N.D. -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -0.6 -1.0 N.D. -0.1
ecofab LB in EcoFAB_3.5mL -0.7 -0.6 -1.5 N.D. +0.1
carbon source Protocatechuic Acid (C) -2.4 -0.2 +0.1 N.D. -0.2
carbon source succinate (C) -0.6 -0.4 -1.4 N.D. -0.1
carbon source propionate (C) -0.6 -0.1 -1.9 N.D. -0.0
carbon source 2-Deoxy-D-Ribose (C) -0.2 -0.4 -1.9 N.D. +0.0
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.9 -0.2 -0.5 N.D. -0.0
carbon source 2-Deoxy-D-Ribose (C) -0.8 -0.5 -1.2 N.D. +0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.3 -0.4 -2.1 N.D. -0.0
carbon source 2'-Deoxyinosine 5 mM (C) -0.6 -0.5 -1.3 N.D. +0.3
carbon source Hexanoic (C) -0.9 +1.1 -2.2 N.D. -0.0
carbon source D-Glucose (C) +0.4 -0.5 -1.4 N.D. -0.3
carbon source Hexanoic (C) -0.6 +0.9 -1.9 N.D. -0.2
carbon source 4-Hydroxybenzoic Acid (C) -0.9 -1.5 +1.3 N.D. +0.4
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