Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_00518 and H281DRAFT_00519 are separated by 76 nucleotidesH281DRAFT_00519 and H281DRAFT_00520 are separated by 706 nucleotidesH281DRAFT_00520 and H281DRAFT_00521 are separated by 143 nucleotidesH281DRAFT_00521 and H281DRAFT_00522 are separated by 31 nucleotides H281DRAFT_00518: H281DRAFT_00518 - Putative negative regulator of RcsB-dependent stress response, at 579,656 to 580,285 _00518 H281DRAFT_00519: H281DRAFT_00519 - Beta-barrel assembly machine subunit BamB, at 580,362 to 581,507 _00519 H281DRAFT_00520: H281DRAFT_00520 - GTP-binding protein, at 582,214 to 583,551 _00520 H281DRAFT_00521: H281DRAFT_00521 - RNA-binding protein Hfq, at 583,695 to 583,931 _00521 H281DRAFT_00522: H281DRAFT_00522 - GTP-binding protein HflX, at 583,963 to 585,177 _00522
Group Condition H281DRAFT_00518 H281DRAFT_00519 H281DRAFT_00520 H281DRAFT_00521 H281DRAFT_00522
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -3.4 N.D. N.D. N.D. -0.5
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.5 N.D. N.D. N.D. -0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.1 N.D. N.D. N.D. -0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.5 N.D. N.D. N.D. -0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.4 N.D. N.D. N.D. -0.8
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.3 N.D. N.D. N.D. -0.7
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.6 N.D. N.D. N.D. -0.3
in planta Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.3 N.D. N.D. N.D. -0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.5 N.D. N.D. N.D. -0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -1.4 N.D. N.D. N.D. -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 N.D. N.D. N.D. -0.4
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x -1.3 N.D. N.D. N.D. -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.6 N.D. N.D. N.D. +0.2
ecofab LB in EcoFAB_3.5mL -1.1 N.D. N.D. N.D. -0.2
carbon source L-Glutamic (C) -0.6 N.D. N.D. N.D. -0.6
carbon source D-Galactose (C) -0.4 N.D. N.D. N.D. -0.8
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x -0.9 N.D. N.D. N.D. -0.3
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.4 N.D. N.D. N.D. -0.6
control NoPhageControl -0.7 N.D. N.D. N.D. -0.3
carbon source Phenylacetic (C) +1.0 N.D. N.D. N.D. -0.7
carbon source Phenylacetic (C) +1.1 N.D. N.D. N.D. -0.4
carbon source 4-Hydroxybenzoic Acid (C) +2.5 N.D. N.D. N.D. -1.4
carbon source Valeric (C) +0.7 N.D. N.D. N.D. +0.3
carbon source 2-Deoxy-D-Ribose (C) +0.3 N.D. N.D. N.D. +0.7
carbon source Hexanoic (C) +0.8 N.D. N.D. N.D. +0.3
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +1.1 N.D. N.D. N.D. +0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) +0.6 N.D. N.D. N.D. +0.7
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.5 N.D. N.D. N.D. +0.8
carbon source adipate (C) +0.5 N.D. N.D. N.D. +1.1
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +1.1 N.D. N.D. N.D. +0.7
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