Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_00490 and H281DRAFT_00491 overlap by 8 nucleotidesH281DRAFT_00491 and H281DRAFT_00492 are separated by 93 nucleotidesH281DRAFT_00492 and H281DRAFT_00493 are separated by 124 nucleotidesH281DRAFT_00493 and H281DRAFT_00494 are separated by 321 nucleotides H281DRAFT_00490: H281DRAFT_00490 - lipoprotein-releasing system permease protein, at 549,398 to 550,651 _00490 H281DRAFT_00491: H281DRAFT_00491 - lipoprotein-releasing system ATP-binding protein, at 550,644 to 551,387 _00491 H281DRAFT_00492: H281DRAFT_00492 - TatD DNase family protein, at 551,481 to 552,269 _00492 H281DRAFT_00493: H281DRAFT_00493 - competence protein ComEC, at 552,394 to 555,198 _00493 H281DRAFT_00494: H281DRAFT_00494 - Pimeloyl-ACP methyl ester carboxylesterase, at 555,520 to 556,239 _00494
Group Condition H281DRAFT_00490 H281DRAFT_00491 H281DRAFT_00492 H281DRAFT_00493 H281DRAFT_00494
carbon source butyrate (C) N.D. N.D. -0.5 -0.4 -0.3
carbon source butyrate (C) N.D. N.D. -0.2 -0.4 -0.2
carbon source Phenylacetic (C) N.D. N.D. -0.1 -0.2 -0.3
carbon source D,L-Lactate (C) N.D. N.D. -0.2 -0.1 -0.3
carbon source 2'-Deoxyinosine 5 mM (C) N.D. N.D. -0.1 -0.4 -0.2
phage Bu1_100 N.D. N.D. -0.6 +0.1 -0.1
carbon source Azelaic (C) N.D. N.D. -0.2 -0.3 +0.0
carbon source Sebacic (C) N.D. N.D. -0.4 -0.1 +0.1
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days N.D. N.D. -0.2 +0.0 -0.4
carbon source D-Glucose (C) N.D. N.D. +0.1 -0.3 -0.2
carbon source 2-Deoxy-D-Ribose 20 mM (C) N.D. N.D. +0.1 -0.4 -0.2
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) N.D. N.D. +0.0 -0.4 -0.1
carbon source adipate (C) N.D. N.D. -0.3 -0.1 +0.1
carbon source 3-Hydroxypropionate (C) N.D. N.D. +0.1 -0.3 -0.2
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.1x; and D-Glucose 99.9 mM N.D. N.D. -0.3 -0.2 +0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x N.D. N.D. -0.4 -0.1 +0.2
carbon source D-Glucose 20 mM (C) N.D. N.D. +0.1 -0.4 -0.1
carbon source 3-hydroxybutyric (C) N.D. N.D. +0.1 -0.3 -0.1
carbon source 2-Deoxy-D-Ribose (C) N.D. N.D. +0.2 -0.3 -0.2
carbon source propionate (C) N.D. N.D. -0.1 -0.2 +0.2
carbon source Dodecandioic (C) N.D. N.D. +0.2 -0.5 +0.1
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) N.D. N.D. +0.2 -0.2 -0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +0.3 +0.0 -0.3
carbon source adipate (C) N.D. N.D. -0.1 -0.1 +0.3
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x N.D. N.D. +0.0 -0.2 +0.4
carbon source Valeric (C) N.D. N.D. -0.1 +0.2 +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +0.3 +0.1 +0.2
phage Bu1_10 N.D. N.D. +0.3 +0.1 +0.3
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +0.4 +0.0 +0.2
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days N.D. N.D. +0.2 +0.5 +0.1
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