Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_00485 and H281DRAFT_00486 are separated by 235 nucleotidesH281DRAFT_00486 and H281DRAFT_00487 are separated by 103 nucleotidesH281DRAFT_00487 and H281DRAFT_00488 overlap by 52 nucleotidesH281DRAFT_00488 and H281DRAFT_00489 are separated by 37 nucleotides H281DRAFT_00485: H281DRAFT_00485 - Glycine zipper 2TM domain-containing protein, at 542,065 to 542,829 _00485 H281DRAFT_00486: H281DRAFT_00486 - lysyl-tRNA synthetase, class II, at 543,065 to 544,675 _00486 H281DRAFT_00487: H281DRAFT_00487 - bacterial peptide chain release factor 2 (bRF-2), at 544,779 to 546,098 _00487 H281DRAFT_00488: H281DRAFT_00488 - exonuclease RecJ, at 546,047 to 547,753 _00488 H281DRAFT_00489: H281DRAFT_00489 - hypothetical protein, at 547,791 to 548,975 _00489
Group Condition H281DRAFT_00485 H281DRAFT_00486 H281DRAFT_00487 H281DRAFT_00488 H281DRAFT_00489
carbon source adipate (C) -0.7 N.D. -1.2 -0.6 N.D.
carbon source acetate (C) -0.4 N.D. -0.8 -0.2 N.D.
carbon source D-Glucose (C) -0.3 N.D. +0.2 -0.9 N.D.
carbon source Hexanoic (C) +0.2 N.D. -1.5 +0.5 N.D.
carbon source butyrate (C) -0.5 N.D. +0.5 -0.8 N.D.
carbon source acetate (C) +0.1 N.D. -1.2 +0.3 N.D.
carbon source 4-Hydroxybenzoic Acid (C) +0.0 N.D. -1.3 +1.1 N.D.
carbon source 2'-Deoxyinosine 5 mM (C) -0.2 N.D. +1.2 -1.0 N.D.
carbon source 2'-Deoxyinosine 10 mM (C) -0.0 N.D. +0.8 -0.7 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt (C) -0.3 N.D. +0.8 -0.3 N.D.
carbon source 2'-Deoxyinosine 10 mM (C) +0.2 N.D. +1.3 -1.1 N.D.
phage Bu1_100 -0.5 N.D. +0.2 +0.8 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) -0.1 N.D. +1.1 -0.4 N.D.
phage Bu1_10 +0.4 N.D. -0.9 +1.1 N.D.
ecofab LB in EcoFAB_3.5mL +0.3 N.D. +0.8 -0.3 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.1 N.D. +1.3 -0.3 N.D.
carbon source D-Glucose 20 mM (C) -0.1 N.D. +0.9 +0.4 N.D.
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 N.D. +1.3 +0.1 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.2 N.D. +0.8 +0.4 N.D.
carbon source D-Glucose 20 mM (C) +0.1 N.D. +0.8 +0.5 N.D.
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.0 N.D. +0.9 +0.6 N.D.
carbon source L-Glutamic (C) +0.2 N.D. +0.6 +0.7 N.D.
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.2 N.D. +1.2 +0.2 N.D.
phage Bu1_100 +0.1 N.D. +1.0 +0.4 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.0 N.D. +1.2 +0.5 N.D.
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown as spores in 0.5x MS_media_noCarbon with Brachypodium distachyon roots for 27 days 0.5x +0.1 N.D. +1.3 +0.3 N.D.
carbon source 2-Deoxy-D-Ribose 20 mM (C) +0.0 N.D. +1.5 +0.3 N.D.
carbon source 2-Deoxy-D-Ribose 10 mM (C) +0.2 N.D. +1.4 +0.4 N.D.
carbon source 2-Deoxyadenosine 5-monophosphate 5 mM (C) -0.1 N.D. +1.8 +0.5 N.D.
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) +0.5 N.D. +2.0 -0.2 N.D.
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