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Protein
Homologs
Fitness for 5 genes in
Paraburkholderia bryophila 376MFSha3.1
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
H281DRAFT_00463 and H281DRAFT_00464 are separated by 354 nucleotides
H281DRAFT_00464 and H281DRAFT_00465 overlap by 4 nucleotides
H281DRAFT_00465 and H281DRAFT_00466 are separated by 266 nucleotides
H281DRAFT_00466 and H281DRAFT_00467 are separated by 85 nucleotides
H281DRAFT_00463: H281DRAFT_00463 - methenyltetrahydrofolate cyclohydrolase /5,10-methylenetetrahydrofolate dehydrogenase (NADP+), at 516,525 to 517,385
_00463
H281DRAFT_00464: H281DRAFT_00464 - two component transcriptional regulator, LuxR family, at 517,740 to 518,387
_00464
H281DRAFT_00465: H281DRAFT_00465 - PAS/PAC sensor signal transduction histidine kinase /multi-sensor signal transduction histidine kinase, at 518,384 to 520,909
_00465
H281DRAFT_00466: H281DRAFT_00466 - pyruvate dehydrogenase E1 component, at 521,176 to 523,872
_00466
H281DRAFT_00467: H281DRAFT_00467 - pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase), at 523,958 to 525,646
_00467
Group
Condition
H281DRAFT
_00463
H281DRAFT
_00464
H281DRAFT
_00465
H281DRAFT
_00466
H281DRAFT
_00467
in planta
Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
N.D.
N.D.
-4.9
N.D.
N.D.
carbon source
2-Deoxy-D-Ribose (C)
N.D.
N.D.
-4.6
N.D.
N.D.
carbon source
Dodecandioic (C)
N.D.
N.D.
-4.6
N.D.
N.D.
carbon source
3-Hydroxypropionate (C)
N.D.
N.D.
-4.6
N.D.
N.D.
in planta
Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
N.D.
N.D.
-4.3
N.D.
N.D.
carbon source
2-Deoxy-D-Ribose 10 mM (C)
N.D.
N.D.
-4.3
N.D.
N.D.
carbon source
3-Hydroxypropionate (C)
N.D.
N.D.
-4.1
N.D.
N.D.
carbon source
2-Deoxy-D-ribonic lithium salt 10 mM (C)
N.D.
N.D.
-4.1
N.D.
N.D.
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
N.D.
N.D.
-4.1
N.D.
N.D.
carbon source
2-Deoxy-D-Ribose (C)
N.D.
N.D.
-3.9
N.D.
N.D.
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
N.D.
N.D.
-3.7
N.D.
N.D.
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
N.D.
N.D.
-3.7
N.D.
N.D.
carbon source
2-Deoxy-D-ribonic lithium salt 10 mM (C)
N.D.
N.D.
-3.6
N.D.
N.D.
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
N.D.
N.D.
-3.5
N.D.
N.D.
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
N.D.
N.D.
-3.5
N.D.
N.D.
carbon source
2-Deoxy-D-Ribose 20 mM (C)
N.D.
N.D.
-3.4
N.D.
N.D.
carbon source
2-Deoxy-D-Ribose (C)
N.D.
N.D.
-3.4
N.D.
N.D.
carbon source
2-Deoxy-D-ribonic lithium salt (C)
N.D.
N.D.
-3.3
N.D.
N.D.
carbon source
Valeric (C)
N.D.
N.D.
-3.3
N.D.
N.D.
in planta
Plant=Brachypodium_distachyon ; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
N.D.
N.D.
-3.3
N.D.
N.D.
carbon source
2-Deoxy-D-Ribose 10 mM (C)
N.D.
N.D.
-3.2
N.D.
N.D.
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
N.D.
N.D.
-3.2
N.D.
N.D.
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
N.D.
N.D.
-3.2
N.D.
N.D.
in planta
Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days
N.D.
N.D.
-3.2
N.D.
N.D.
carbon source
Hydroxy-L-Proline (C)
N.D.
N.D.
-3.1
N.D.
N.D.
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
N.D.
N.D.
-3.1
N.D.
N.D.
in planta
Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days
N.D.
N.D.
-2.9
N.D.
N.D.
carbon source
2'-Deoxyinosine 10 mM (C)
N.D.
N.D.
-2.9
N.D.
N.D.
carbon source
2'-Deoxyinosine 5 mM (C)
N.D.
N.D.
-2.8
N.D.
N.D.
carbon source
Hexanoic (C)
N.D.
N.D.
-2.8
N.D.
N.D.
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