Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_00406 and H281DRAFT_00407 are separated by 239 nucleotidesH281DRAFT_00407 and H281DRAFT_00408 are separated by 109 nucleotidesH281DRAFT_00408 and H281DRAFT_00409 are separated by 83 nucleotidesH281DRAFT_00409 and H281DRAFT_00410 overlap by 41 nucleotides H281DRAFT_00406: H281DRAFT_00406 - Signal transduction histidine kinase, at 449,393 to 450,934 _00406 H281DRAFT_00407: H281DRAFT_00407 - Protein of unknown function (DUF1328), at 451,174 to 451,350 _00407 H281DRAFT_00408: H281DRAFT_00408 - Protein of unknown function (DUF1328), at 451,460 to 451,621 _00408 H281DRAFT_00409: H281DRAFT_00409 - bacterioferritin, at 451,705 to 452,277 _00409 H281DRAFT_00410: H281DRAFT_00410 - two component transcriptional regulator, LuxR family, at 452,237 to 453,028 _00410
Group Condition H281DRAFT_00406 H281DRAFT_00407 H281DRAFT_00408 H281DRAFT_00409 H281DRAFT_00410
phage Bu1_100 -2.0 N.D. +0.6 -1.5 +0.4
carbon source 2'-Deoxyinosine 5 mM (C) -0.6 N.D. -0.7 +0.2 -0.9
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.7 N.D. -0.4 -0.5 -0.1
carbon source butyrate (C) +0.0 N.D. -0.1 -0.9 -0.6
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.8 N.D. -0.4 -0.1 -0.1
ecofab LB in EcoFAB_3.5mL -0.1 N.D. -0.7 -0.1 -0.5
carbon source 2'-Deoxyinosine 5 mM (C) -0.4 N.D. -0.2 -0.4 -0.4
carbon source Protocatechuic Acid (C) -0.3 N.D. +0.1 -0.6 -0.5
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.6 N.D. +0.1 -0.7 -0.1
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.9 N.D. -0.4 -0.9 -0.6
carbon source Malonic (C) -0.1 N.D. -0.7 +0.3 -0.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.5 N.D. -0.0 -0.6 -0.6
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.3 N.D. -0.3 +0.5 -0.8
carbon source Valeric (C) +0.7 N.D. -0.5 -0.9 +0.1
phage Bu1_10 -0.2 N.D. +0.4 -0.6 +0.2
supernatant RCH2_defined_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x -0.5 N.D. +0.5 +0.3 -0.4
carbon source 2-Deoxyadenosine 5-monophosphate 2.5 mM (C) +0.6 N.D. -0.7 +0.4 -0.2
carbon source propionate (C) +1.0 N.D. -0.3 -0.4 +0.0
carbon source Azelaic (C) +1.1 N.D. +0.1 -0.5 -0.3
carbon source Gallic Acid (C) +0.2 N.D. +0.4 +0.4 -0.5
carbon source D-Galactose (C) -0.5 N.D. +0.4 +0.6 +0.1
carbon source Valeric (C) +0.4 N.D. +0.7 -0.3 -0.2
carbon source Suberic (C) +0.8 N.D. +0.6 +0.3 -0.3
carbon source Protocatechuic Acid (C) +0.9 N.D. +0.2 +0.3 +0.0
carbon source 2-furoic (C) +0.4 N.D. +0.5 +0.4 +0.2
carbon source adipate (C) +1.3 N.D. +0.8 -0.7 +0.4
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 1x +0.8 N.D. +0.7 +0.2 +0.1
carbon source Hexanoic (C) +0.7 N.D. +0.5 +0.3 +0.3
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +0.9 N.D. +0.9 +0.3 -0.1
carbon source Hydroxy-L-Proline (C) +0.6 N.D. +0.5 +0.7 +0.3
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