Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

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500 ntH281DRAFT_00380 and H281DRAFT_00381 are separated by 52 nucleotidesH281DRAFT_00381 and H281DRAFT_00382 are separated by 350 nucleotidesH281DRAFT_00382 and H281DRAFT_00383 are separated by 22 nucleotidesH281DRAFT_00383 and H281DRAFT_00384 overlap by 1 nucleotides H281DRAFT_00380: H281DRAFT_00380 - nucleobase:cation symporter-1, NCS1 family, at 419,419 to 420,930 _00380 H281DRAFT_00381: H281DRAFT_00381 - dihydropyrimidinase, at 420,983 to 422,434 _00381 H281DRAFT_00382: H281DRAFT_00382 - amino acid ABC transporter substrate-binding protein, PAAT family, at 422,785 to 423,567 _00382 H281DRAFT_00383: H281DRAFT_00383 - amino acid ABC transporter membrane protein, PAAT family, at 423,590 to 424,267 _00383 H281DRAFT_00384: H281DRAFT_00384 - amino acid ABC transporter ATP-binding protein, PAAT family, at 424,267 to 425,034 _00384
Group Condition H281DRAFT_00380 H281DRAFT_00381 H281DRAFT_00382 H281DRAFT_00383 H281DRAFT_00384
carbon source Azelaic (C) +0.2 -0.3 -2.3 -0.6 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.0 -0.3 -0.7 -0.6 -0.3
carbon source 2-Deoxy-D-Ribose (C) +0.2 +0.3 -0.8 -0.5 -0.8
carbon source adipate (C) -0.3 -0.7 -1.2 +0.2 +0.5
carbon source propionate (C) -0.0 -0.1 -0.8 -0.6 +0.1
carbon source butyrate (C) +0.0 -0.8 -0.3 -0.6 +0.4
carbon source butyrate (C) +0.0 -0.5 -0.5 -0.5 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.0 -0.4 +0.1 -0.8 -0.1
carbon source Valeric (C) +0.1 -0.4 -0.2 -0.7 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=soil; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 +0.1 -0.5 -0.6 -0.1
carbon source adipate (C) -0.0 +0.2 -0.6 -0.9 +0.3
carbon source Phenylacetic (C) -0.0 -0.3 -0.6 +0.3 -0.1
carbon source 2-Deoxy-D-Ribose (C) -0.1 +0.7 -0.9 -0.2 -0.1
carbon source 2'-Deoxyinosine 10 mM (C) -0.0 +0.2 +0.2 -0.7 -0.4
carbon source 2'-Deoxyinosine 5 mM (C) -0.2 -0.1 -0.2 -0.6 +0.3
carbon source D-Glucose (C) +0.1 +0.3 -0.7 -0.6 +0.1
in planta Plant=Zea_mays; PlantTreatment=None; Sample=root; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.1 -0.0 +0.3 -0.6 -0.3
carbon source propionate (C) -0.0 +0.2 -0.9 +0.3 -0.1
carbon source acetate (C) +0.2 -0.4 -0.0 -0.5 +0.4
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.0 -0.5 +0.1 +0.5 -0.4
carbon source D-Glucose (C) -0.3 +0.3 -0.6 -0.1 +0.5
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM -0.1 -0.3 +0.6 +0.2 -0.4
carbon source D-Glucose (C) -0.1 +0.4 -0.3 +0.3 -0.3
carbon source 4-Hydroxybenzoic Acid (C) -0.2 -0.3 -0.3 +0.3 +0.6
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -0.2 +0.4 -0.6 +0.2 +0.3
carbon source 2-Deoxy-D-ribonic lithium salt (C) +0.3 +0.4 -0.6 +0.3 -0.0
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days -0.2 +0.2 +0.1 +0.8 -0.4
carbon source Sebacic (C) +0.2 +0.4 -0.2 -0.5 +0.5
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -0.2 +0.5 +0.1 -0.0 +0.8
phage Bu1_100 +0.1 +0.2 +0.7 +0.3 +0.9
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