Fitness for 5 genes in Paraburkholderia bryophila 376MFSha3.1

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 128 experiments or choose conditions or try the comparative fitness browser

500 ntH281DRAFT_00375 and H281DRAFT_00376 are separated by 34 nucleotidesH281DRAFT_00376 and H281DRAFT_00377 are separated by 302 nucleotidesH281DRAFT_00377 and H281DRAFT_00378 are separated by 167 nucleotidesH281DRAFT_00378 and H281DRAFT_00379 are separated by 60 nucleotides H281DRAFT_00375: H281DRAFT_00375 - benzoyl-CoA oxygenase, component A, at 412,787 to 414,028 _00375 H281DRAFT_00376: H281DRAFT_00376 - transcriptional regulator, TetR family, at 414,063 to 414,803 _00376 H281DRAFT_00377: H281DRAFT_00377 - N-carbamoyl-L-amino-acid hydrolase, at 415,106 to 416,386 _00377 H281DRAFT_00378: H281DRAFT_00378 - glutamate synthase (NADPH/NADH) small chain, at 416,554 to 417,903 _00378 H281DRAFT_00379: H281DRAFT_00379 - dihydroorotate oxidase B, catalytic subunit /dihydrouracil dehydrogenase (NAD+) /dihydropyrimidine dehydrogenase (NADP+), at 417,964 to 419,292 _00379
Group Condition H281DRAFT_00375 H281DRAFT_00376 H281DRAFT_00377 H281DRAFT_00378 H281DRAFT_00379
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.5 -0.1 -0.6 -0.6 -0.2
phage Bu1_100 +1.0 +0.5 -0.9 -2.1 -0.7
carbon source Azelaic (C) -0.2 -1.4 +0.1 +0.6 -0.7
carbon source 2'-Deoxyinosine 10 mM (C) -1.2 -0.6 -0.1 +0.1 +0.6
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8x; and D-Glucose 22.2 mM +0.8 +0.1 -0.5 -0.2 -1.3
carbon source D-Glucose (C) +0.4 -0.0 +0.2 +0.3 -1.9
carbon source p-Coumaric (C) -1.8 +0.5 +0.5 +0.2 -0.1
carbon source 2-Deoxy-D-Ribose 10 mM (C) -1.0 -0.3 +0.5 -0.7 +0.9
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=14_days -1.0 -0.2 -0.3 -0.3 +1.1
phage Bu1_100 +0.4 +0.9 -0.9 -0.2 -0.8
carbon source Malonic (C) -0.5 +0.6 +0.4 -0.8 -0.3
carbon source 2'-Deoxyinosine 5 mM (C) +0.1 -0.5 +0.3 -1.0 +0.9
carbon source Deoxyribonucleic from herring sperm 10 mg/mL (C) -1.4 -0.2 +1.1 -0.2 +0.7
supernatant Fungal_growth_media_mCAFEs_v1_noCarbon with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x; and D-Glucose 55.5 mM +0.3 +0.3 +0.7 -0.2 -1.1
carbon source 2'-Deoxyinosine 10 mM (C) -0.3 -0.2 +0.9 -0.8 +0.6
in planta Plant=Zea mays subsp. mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth; Time=14_days +0.0 +0.1 +0.2 -1.6 +1.6
carbon source 2'-Deoxyinosine 5 mM (C) -0.2 -0.4 +0.5 -0.6 +1.4
carbon source Protocatechuic Acid (C) +0.8 +0.4 +0.5 +0.0 -0.9
carbon source 2-furoic (C) +0.7 +0.7 +0.3 -0.1 -0.8
carbon source 2-Deoxy-D-Ribose 20 mM (C) -0.1 -0.5 +0.7 -0.3 +1.2
carbon source D-Glucose (C) +0.6 -0.1 -0.4 -0.2 +1.2
lb LB +0.8 +0.1 -0.4 -0.4 +1.6
carbon source D-Glucose (C) +0.4 +0.5 -0.3 -0.2 +1.3
carbon source 2-Deoxy-D-ribonic lithium salt 10 mM (C) -0.0 -0.3 +0.9 +0.5 +1.2
ecofab LB in EcoFAB_3.5mL +0.2 -0.3 +0.7 +0.6 +1.0
carbon source 3-hydroxybutyric (C) +0.9 +0.2 +0.4 -0.2 +1.0
supernatant LB 0.5x with Supernatant; Trichoderma virens G41 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.5x +1.3 +0.3 +0.3 +0.9 -0.5
carbon source adipate (C) +0.5 +0.9 +1.1 +0.3 -0.3
carbon source 2-furoic (C) +0.3 +1.1 +1.0 +0.8 -0.7
carbon source Sebacic (C) +0.5 +0.0 +0.3 +0.7 +1.2
remove
H281DRAFT_00375
plot		 remove
H281DRAFT_00376
plot		 remove
H281DRAFT_00377		 remove
H281DRAFT_00378
plot		 remove
H281DRAFT_00379
plot